Analysis of interatomic Contacts of Structural Units in PDB entry:
7W6Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7W6Q entry

There are 2 chains in PDB entry 7W6Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 2PHE 258
B
 ASN 2PHE 258
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 7W6Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 17Right-handed alpha
Helix 2
AA2
A
65 70Right-handed 310
Helix 3
AA3
A
71 78Right-handed alpha
Helix 4
AA4
A
94 112Right-handed alpha
Helix 5
AA5
A
115 117Right-handed 310
Helix 6
AA6
A
130 141Right-handed alpha
Helix 7
AA7
A
184 192Right-handed alpha
Helix 8
AA8
A
207 213Right-handed 310
Helix 9
AA9
A
215 231Right-handed alpha
Helix 10
AB1
A
233 240Right-handed 310
Helix 11
AB2
B
11 17Right-handed alpha
Helix 12
AB3
B
65 70Right-handed 310
Helix 13
AB4
B
71 78Right-handed alpha
Helix 14
AB5
B
94 112Right-handed alpha
Helix 15
AB6
B
115 117Right-handed 310
Helix 16
AB7
B
130 142Right-handed alpha
Helix 17
AB8
B
184 192Right-handed alpha
Helix 18
AB9
B
209 213Right-handed 310
Helix 19
AC1
B
215 231Right-handed alpha
Helix 20
AC2
B
233 240Right-handed 310
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There are 4 sheets in PDB entry 7W6Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 29first strand
Strand 2
A
40 45anti-parallel
Strand 3
A
81 86anti-parallel
Strand 4
A
53 59parallel
Strand 5
A
119 129parallel
Strand 6
A
148 152parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
168 173first strand
Strand 2
A
198 203parallel
Strand 3
A
249 254anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 29first strand
Strand 2
B
40 45anti-parallel
Strand 3
B
81 86anti-parallel
Strand 4
B
53 59parallel
Strand 5
B
119 129parallel
Strand 6
B
148 152parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
169 173first strand
Strand 2
B
199 203parallel
Strand 3
B
249 254anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il