Analysis of interatomic Contacts of Structural Units in PDB entry:
7W6S

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7W6S entry

There are 8 chains in PDB entry 7W6S (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 92	ILE 270
B	GLY 4	THR 487
C	GLY 92	ILE 270
D	GLY 4	THR 487
E	GLY 92	ILE 270
F	GLY 4	THR 487
G	GLY 92	ILE 270
H	GLY 4	THR 487

There are136 helices in PDB entry 7W6S. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	92	100	Right-handed alpha
Helix 2	AA2	A	103	118	Right-handed alpha
Helix 3	AA3	A	124	133	Right-handed alpha
Helix 4	AA4	A	141	153	Right-handed alpha
Helix 5	AA5	A	161	174	Right-handed alpha
Helix 6	AA6	A	176	189	Right-handed alpha
Helix 7	AA7	A	197	211	Right-handed alpha
Helix 8	AA8	A	222	236	Right-handed alpha
Helix 9	AA9	A	246	255	Right-handed alpha
Helix 10	AB1	A	257	263	Right-handed alpha
Helix 11	AB2	A	264	268	Right-handed 310
Helix 12	AB3	B	8	16	Right-handed alpha
Helix 13	AB4	B	17	19	Right-handed 310
Helix 14	AB5	B	55	59	Right-handed alpha
Helix 15	AB6	B	69	73	Right-handed 310
Helix 16	AB7	B	90	100	Right-handed alpha
Helix 17	AB8	B	110	122	Right-handed alpha
Helix 18	AB9	B	124	128	Right-handed 310
Helix 19	AC1	B	129	132	Right-handed 310
Helix 20	AC2	B	133	148	Right-handed alpha
Helix 21	AC3	B	166	174	Right-handed alpha
Helix 22	AC4	B	179	203	Right-handed alpha
Helix 23	AC5	B	217	222	Right-handed alpha
Helix 24	AC6	B	222	247	Right-handed alpha
Helix 25	AC7	B	257	276	Right-handed alpha
Helix 26	AC8	B	277	281	Right-handed 310
Helix 27	AC9	B	286	292	Right-handed alpha
Helix 28	AD1	B	293	303	Right-handed 310
Helix 29	AD2	B	304	317	Right-handed alpha
Helix 30	AD3	B	317	344	Right-handed alpha
Helix 31	AD4	B	355	366	Right-handed alpha
Helix 32	AD5	B	377	396	Right-handed alpha
Helix 33	AD6	B	397	446	Right-handed alpha
Helix 34	AD7	B	472	484	Right-handed alpha
Helix 35	AD8	C	93	100	Right-handed alpha
Helix 36	AD9	C	103	118	Right-handed alpha
Helix 37	AE1	C	124	133	Right-handed alpha
Helix 38	AE2	C	141	153	Right-handed alpha
Helix 39	AE3	C	161	174	Right-handed alpha
Helix 40	AE4	C	176	189	Right-handed alpha
Helix 41	AE5	C	197	211	Right-handed alpha
Helix 42	AE6	C	222	236	Right-handed alpha
Helix 43	AE7	C	246	255	Right-handed alpha
Helix 44	AE8	C	257	263	Right-handed alpha
Helix 45	AE9	C	264	268	Right-handed 310
Helix 46	AF1	D	8	16	Right-handed alpha
Helix 47	AF2	D	17	19	Right-handed 310
Helix 48	AF3	D	55	59	Right-handed alpha
Helix 49	AF4	D	69	73	Right-handed 310
Helix 50	AF5	D	90	100	Right-handed alpha
Helix 51	AF6	D	110	122	Right-handed alpha
Helix 52	AF7	D	124	128	Right-handed 310
Helix 53	AF8	D	129	132	Right-handed 310
Helix 54	AF9	D	133	148	Right-handed alpha
Helix 55	AG1	D	166	174	Right-handed alpha
Helix 56	AG2	D	179	203	Right-handed alpha
Helix 57	AG3	D	217	222	Right-handed alpha
Helix 58	AG4	D	222	247	Right-handed alpha
Helix 59	AG5	D	257	276	Right-handed alpha
Helix 60	AG6	D	277	281	Right-handed 310
Helix 61	AG7	D	286	292	Right-handed alpha
Helix 62	AG8	D	293	303	Right-handed 310
Helix 63	AG9	D	304	317	Right-handed alpha
Helix 64	AH1	D	317	344	Right-handed alpha
Helix 65	AH2	D	355	366	Right-handed alpha
Helix 66	AH3	D	377	396	Right-handed alpha
Helix 67	AH4	D	397	446	Right-handed alpha
Helix 68	AH5	D	472	484	Right-handed alpha
Helix 69	AH6	E	93	100	Right-handed alpha
Helix 70	AH7	E	103	118	Right-handed alpha
Helix 71	AH8	E	124	133	Right-handed alpha
Helix 72	AH9	E	141	153	Right-handed alpha
Helix 73	AI1	E	161	174	Right-handed alpha
Helix 74	AI2	E	176	189	Right-handed alpha
Helix 75	AI3	E	197	211	Right-handed alpha
Helix 76	AI4	E	222	236	Right-handed alpha
Helix 77	AI5	E	246	255	Right-handed alpha
Helix 78	AI6	E	257	263	Right-handed alpha
Helix 79	AI7	E	264	268	Right-handed 310
Helix 80	AI8	F	8	16	Right-handed alpha
Helix 81	AI9	F	17	19	Right-handed 310
Helix 82	AJ1	F	55	59	Right-handed alpha
Helix 83	AJ2	F	69	73	Right-handed 310
Helix 84	AJ3	F	90	100	Right-handed alpha
Helix 85	AJ4	F	110	122	Right-handed alpha
Helix 86	AJ5	F	124	128	Right-handed 310
Helix 87	AJ6	F	129	132	Right-handed 310
Helix 88	AJ7	F	133	148	Right-handed alpha
Helix 89	AJ8	F	166	174	Right-handed alpha
Helix 90	AJ9	F	179	203	Right-handed alpha
Helix 91	AK1	F	217	222	Right-handed alpha
Helix 92	AK2	F	222	247	Right-handed alpha
Helix 93	AK3	F	257	276	Right-handed alpha
Helix 94	AK4	F	277	281	Right-handed 310
Helix 95	AK5	F	286	292	Right-handed alpha
Helix 96	AK6	F	293	303	Right-handed 310
Helix 97	AK7	F	304	317	Right-handed alpha
Helix 98	AK8	F	317	344	Right-handed alpha
Helix 99	AK9	F	355	366	Right-handed alpha
Helix 100	AL1	F	377	396	Right-handed alpha
Helix 101	AL2	F	397	446	Right-handed alpha
Helix 102	AL3	F	472	484	Right-handed alpha
Helix 103	AL4	G	93	100	Right-handed alpha
Helix 104	AL5	G	103	118	Right-handed alpha
Helix 105	AL6	G	124	133	Right-handed alpha
Helix 106	AL7	G	141	153	Right-handed alpha
Helix 107	AL8	G	161	174	Right-handed alpha
Helix 108	AL9	G	176	189	Right-handed alpha
Helix 109	AM1	G	197	211	Right-handed alpha
Helix 110	AM2	G	222	236	Right-handed alpha
Helix 111	AM3	G	246	255	Right-handed alpha
Helix 112	AM4	G	257	263	Right-handed alpha
Helix 113	AM5	G	264	268	Right-handed 310
Helix 114	AM6	H	8	16	Right-handed alpha
Helix 115	AM7	H	17	19	Right-handed 310
Helix 116	AM8	H	55	59	Right-handed alpha
Helix 117	AM9	H	69	73	Right-handed 310
Helix 118	AN1	H	90	100	Right-handed alpha
Helix 119	AN2	H	110	122	Right-handed alpha
Helix 120	AN3	H	124	128	Right-handed 310
Helix 121	AN4	H	129	132	Right-handed 310
Helix 122	AN5	H	133	148	Right-handed alpha
Helix 123	AN6	H	166	174	Right-handed alpha
Helix 124	AN7	H	179	203	Right-handed alpha
Helix 125	AN8	H	217	222	Right-handed alpha
Helix 126	AN9	H	222	247	Right-handed alpha
Helix 127	AO1	H	257	276	Right-handed alpha
Helix 128	AO2	H	277	281	Right-handed 310
Helix 129	AO3	H	286	292	Right-handed alpha
Helix 130	AO4	H	293	303	Right-handed 310
Helix 131	AO5	H	304	317	Right-handed alpha
Helix 132	AO6	H	317	344	Right-handed alpha
Helix 133	AO7	H	355	366	Right-handed alpha
Helix 134	AO8	H	377	396	Right-handed alpha
Helix 135	AO9	H	397	446	Right-handed alpha
Helix 136	AP1	H	472	484	Right-handed alpha

There are 8 sheets in PDB entry 7W6S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	195	196	first strand
Strand 2	A	244	245	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	49	54	first strand
Strand 2	B	41	46	anti-parallel
Strand 3	B	81	84	parallel
Strand 4	B	75	76	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	195	196	first strand
Strand 2	C	244	245	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	49	54	first strand
Strand 2	D	41	46	anti-parallel
Strand 3	D	81	84	parallel
Strand 4	D	75	76	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	195	196	first strand
Strand 2	E	244	245	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	49	54	first strand
Strand 2	F	41	46	anti-parallel
Strand 3	F	81	84	parallel
Strand 4	F	75	76	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	195	196	first strand
Strand 2	G	244	245	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	49	54	first strand
Strand 2	H	41	46	anti-parallel
Strand 3	H	81	84	parallel
Strand 4	H	75	76	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7W6S

Analysis of interatomic Contacts of Structural Units in PDB entry:
7W6S