Analysis of interatomic Contacts of Structural Units in PDB entry:
7W6W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7W6W entry

There are 4 chains in PDB entry 7W6W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2ALA 198
B
 ALA 2LYS 199
C
 ALA 2ALA 197
D
 ALA 2ALA 198
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 7W6W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 30Right-handed alpha
Helix 2
AA2
A
30 44Right-handed alpha
Helix 3
AA3
A
46 51Right-handed 310
Helix 4
AA4
A
52 59Right-handed alpha
Helix 5
AA5
A
60 63Right-handed 310
Helix 6
AA6
A
64 87Right-handed alpha
Helix 7
AA7
A
96 107Right-handed alpha
Helix 8
AA8
A
108 123Right-handed alpha
Helix 9
AA9
A
148 153Right-handed 310
Helix 10
AB1
A
163 166Right-handed 310
Helix 11
AB2
A
167 172Right-handed alpha
Helix 12
AB3
A
174 183Right-handed alpha
Helix 13
AB4
A
184 186Right-handed 310
Helix 14
AB5
A
187 198Right-handed alpha
Helix 15
AB6
B
20 30Right-handed alpha
Helix 16
AB7
B
30 44Right-handed alpha
Helix 17
AB8
B
46 51Right-handed 310
Helix 18
AB9
B
52 59Right-handed alpha
Helix 19
AC1
B
60 63Right-handed 310
Helix 20
AC2
B
67 88Right-handed alpha
Helix 21
AC3
B
96 107Right-handed alpha
Helix 22
AC4
B
108 123Right-handed alpha
Helix 23
AC5
B
148 153Right-handed 310
Helix 24
AC6
B
163 166Right-handed 310
Helix 25
AC7
B
167 172Right-handed alpha
Helix 26
AC8
B
174 183Right-handed alpha
Helix 27
AC9
B
184 186Right-handed 310
Helix 28
AD1
B
187 199Right-handed alpha
Helix 29
AD2
C
20 30Right-handed alpha
Helix 30
AD3
C
30 44Right-handed alpha
Helix 31
AD4
C
46 51Right-handed 310
Helix 32
AD5
C
52 59Right-handed alpha
Helix 33
AD6
C
60 63Right-handed 310
Helix 34
AD7
C
64 66Right-handed 310
Helix 35
AD8
C
67 88Right-handed alpha
Helix 36
AD9
C
96 107Right-handed alpha
Helix 37
AE1
C
108 123Right-handed alpha
Helix 38
AE2
C
148 153Right-handed 310
Helix 39
AE3
C
163 166Right-handed 310
Helix 40
AE4
C
167 172Right-handed alpha
Helix 41
AE5
C
174 183Right-handed alpha
Helix 42
AE6
C
184 186Right-handed 310
Helix 43
AE7
C
187 197Right-handed alpha
Helix 44
AE8
D
20 30Right-handed alpha
Helix 45
AE9
D
30 44Right-handed alpha
Helix 46
AF1
D
46 51Right-handed 310
Helix 47
AF2
D
52 59Right-handed alpha
Helix 48
AF3
D
60 63Right-handed 310
Helix 49
AF4
D
67 87Right-handed alpha
Helix 50
AF5
D
96 107Right-handed alpha
Helix 51
AF6
D
108 123Right-handed alpha
Helix 52
AF7
D
148 153Right-handed 310
Helix 53
AF8
D
163 166Right-handed 310
Helix 54
AF9
D
167 172Right-handed alpha
Helix 55
AG1
D
174 183Right-handed alpha
Helix 56
AG2
D
184 186Right-handed 310
Helix 57
AG3
D
187 198Right-handed alpha
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There are 4 sheets in PDB entry 7W6W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 144first strand
Strand 2
A
127 134anti-parallel
Strand 3
A
155 161anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
137 144first strand
Strand 2
B
127 134anti-parallel
Strand 3
B
155 161anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
137 144first strand
Strand 2
C
127 134anti-parallel
Strand 3
C
155 161anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
137 144first strand
Strand 2
D
127 134anti-parallel
Strand 3
D
155 161anti-parallel
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