Analysis of interatomic Contacts of Structural Units in PDB entry:
7W75


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7W75 entry

There are 6 chains in PDB entry 7W75 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 2ALA 157
B
THR 3ALA 157
C
GLU 12ASP 170
D
PRO 16ASN 182
E
LEU 13ASP 173
F
GLU 18ASN 182
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 37 helices in PDB entry 7W75. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
3 19Right-handed alpha
Helix 2
AA2
A
89 94Right-handed alpha
Helix 3
AA3
A
101 115Right-handed alpha
Helix 4
AA4
A
123 133Right-handed alpha
Helix 5
AA5
A
133 149Right-handed alpha
Helix 6
AA6
A
153 157Right-handed 310
Helix 7
AA7
B
4 19Right-handed alpha
Helix 8
AA8
B
89 94Right-handed alpha
Helix 9
AA9
B
101 115Right-handed alpha
Helix 10
AB1
B
123 133Right-handed alpha
Helix 11
AB2
B
133 149Right-handed alpha
Helix 12
AB3
B
153 157Right-handed 310
Helix 13
AB4
C
21 65Right-handed alpha
Helix 14
AB5
C
65 81Right-handed alpha
Helix 15
AB6
C
85 97Right-handed alpha
Helix 16
AB7
C
100 111Right-handed alpha
Helix 17
AB8
C
111 123Right-handed alpha
Helix 18
AB9
C
130 170Right-handed alpha
Helix 19
AC1
D
21 28Right-handed 310
Helix 20
AC2
D
29 81Right-handed alpha
Helix 21
AC3
D
85 97Right-handed alpha
Helix 22
AC4
D
100 111Right-handed alpha
Helix 23
AC5
D
111 122Right-handed alpha
Helix 24
AC6
D
129 173Right-handed alpha
Helix 25
AC7
D
174 181Right-handed alpha
Helix 26
AC8
E
21 81Right-handed alpha
Helix 27
AC9
E
85 97Right-handed alpha
Helix 28
AD1
E
100 111Right-handed alpha
Helix 29
AD2
E
111 122Right-handed alpha
Helix 30
AD3
E
129 173Right-handed alpha
Helix 31
AD4
F
21 28Right-handed 310
Helix 32
AD5
F
29 81Right-handed alpha
Helix 33
AD6
F
88 97Right-handed alpha
Helix 34
AD7
F
100 111Right-handed alpha
Helix 35
AD8
F
111 121Right-handed alpha
Helix 36
AD9
F
132 173Right-handed alpha
Helix 37
AE1
F
174 182Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 7W75. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
24 29first strand
Strand 2
A
32 41anti-parallel
Strand 3
A
52 58anti-parallel
Strand 4
A
69 72anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
24 29first strand
Strand 2
B
32 41anti-parallel
Strand 3
B
52 58anti-parallel
Strand 4
B
69 72anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il