Analysis of interatomic Contacts of Structural Units in PDB entry:
7W7E

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7W7E entry

There are 5 chains in PDB entry 7W7E (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 4	TYR 354
B	GLN 6	ASN 340
G	ILE 9	ARG 62
H	ASP 1	LYS 236
R	LEU 45	CYS 457

There are 21 helices in PDB entry 7W7E. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	6	29	Right-handed alpha
Helix 2	AA2	A	46	54	Right-handed alpha
Helix 3	AA3	A	212	217	Right-handed 310
Helix 4	AA4	A	242	255	Right-handed alpha
Helix 5	AA5	A	296	311	Right-handed alpha
Helix 6	AA6	A	329	348	Right-handed alpha
Helix 7	AA7	B	7	25	Right-handed alpha
Helix 8	AA8	G	10	24	Right-handed alpha
Helix 9	AA9	G	29	44	Right-handed alpha
Helix 10	AB1	H	28	32	Right-handed 310
Helix 11	AB2	H	87	91	Right-handed 310
Helix 12	AB3	R	46	76	Right-handed alpha
Helix 13	AB4	R	84	111	Right-handed alpha
Helix 14	AB5	R	121	152	Right-handed alpha
Helix 15	AB6	R	152	158	Right-handed alpha
Helix 16	AB7	R	161	181	Right-handed alpha
Helix 17	AB8	R	208	220	Right-handed alpha
Helix 18	AB9	R	220	242	Right-handed alpha
Helix 19	AC1	R	380	415	Right-handed alpha
Helix 20	AC2	R	421	443	Right-handed alpha
Helix 21	AC3	R	445	457	Right-handed alpha

There are 14 sheets in PDB entry 7W7E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	186	188	first strand
Strand 2	A	195	201	anti-parallel
Strand 3	A	191	192	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	186	188	first strand
Strand 2	A	195	201	anti-parallel
Strand 3	A	34	38	parallel
Strand 4	A	222	225	parallel
Strand 5	A	265	268	parallel
Strand 6	A	319	320	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	49	51	first strand
Strand 2	B	335	339	anti-parallel
Strand 3	B	327	331	anti-parallel
Strand 4	B	315	320	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	63	first strand
Strand 2	B	69	74	anti-parallel
Strand 3	B	78	83	anti-parallel
Strand 4	B	88	94	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	112	114	first strand
Strand 2	B	121	125	anti-parallel
Strand 3	B	134	139	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	151	first strand
Strand 2	B	157	161	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	169	170	first strand
Strand 2	B	175	176	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	190	192	first strand
Strand 2	B	199	201	anti-parallel
Strand 3	B	208	210	anti-parallel
Strand 4	B	220	222	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	253	254	first strand
Strand 2	B	259	260	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	273	278	first strand
Strand 2	B	284	289	anti-parallel
Strand 3	B	295	298	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	4	6	first strand
Strand 2	H	17	24	anti-parallel
Strand 3	H	78	84	anti-parallel
Strand 4	H	69	73	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	47	51	first strand
Strand 2	H	34	37	anti-parallel
Strand 3	H	92	96	anti-parallel
Strand 4	H	115	117	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	182	183	first strand
Strand 2	H	174	178	anti-parallel
Strand 3	H	162	167	anti-parallel
Strand 4	H	214	219	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	193	195	first strand
Strand 2	H	200	202	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7W7E

Analysis of interatomic Contacts of Structural Units in PDB entry:
7W7E