Analysis of interatomic Contacts of Structural Units in PDB entry:
7W7H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7W7H entry

There are 3 chains in PDB entry 7W7H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2GLU 554
B
 SER 2GLU 554
E
 MET 1MET 240
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 7W7H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 23Right-handed alpha
Helix 2
AA2
A
23 30Right-handed alpha
Helix 3
AA3
A
39 57Right-handed alpha
Helix 4
AA4
A
62 78Right-handed alpha
Helix 5
AA5
A
79 97Right-handed alpha
Helix 6
AA6
A
104 121Right-handed alpha
Helix 7
AA7
A
130 147Right-handed alpha
Helix 8
AA8
A
151 174Right-handed alpha
Helix 9
AA9
A
174 181Right-handed alpha
Helix 10
AB1
A
184 202Right-handed alpha
Helix 11
AB2
A
203 208Right-handed alpha
Helix 12
AB3
A
214 216Right-handed 310
Helix 13
AB4
A
217 229Right-handed alpha
Helix 14
AB5
A
262 272Right-handed alpha
Helix 15
AB6
A
294 304Right-handed alpha
Helix 16
AB7
A
316 326Right-handed alpha
Helix 17
AB8
A
347 357Right-handed alpha
Helix 18
AB9
A
372 384Right-handed alpha
Helix 19
AC1
A
394 396Right-handed 310
Helix 20
AC2
A
397 408Right-handed alpha
Helix 21
AC3
A
419 430Right-handed alpha
Helix 22
AC4
A
435 447Right-handed alpha
Helix 23
AC5
A
448 450Right-handed 310
Helix 24
AC6
A
488 499Right-handed alpha
Helix 25
AC7
A
517 532Right-handed alpha
Helix 26
AC8
B
5 30Right-handed alpha
Helix 27
AC9
B
39 58Right-handed alpha
Helix 28
AD1
B
62 78Right-handed alpha
Helix 29
AD2
B
79 97Right-handed alpha
Helix 30
AD3
B
104 121Right-handed alpha
Helix 31
AD4
B
130 147Right-handed alpha
Helix 32
AD5
B
151 170Right-handed alpha
Helix 33
AD6
B
171 173Right-handed 310
Helix 34
AD7
B
174 181Right-handed alpha
Helix 35
AD8
B
184 202Right-handed alpha
Helix 36
AD9
B
203 208Right-handed alpha
Helix 37
AE1
B
214 216Right-handed 310
Helix 38
AE2
B
217 228Right-handed alpha
Helix 39
AE3
B
262 273Right-handed alpha
Helix 40
AE4
B
294 304Right-handed alpha
Helix 41
AE5
B
316 321Right-handed alpha
Helix 42
AE6
B
347 357Right-handed alpha
Helix 43
AE7
B
372 384Right-handed alpha
Helix 44
AE8
B
394 396Right-handed 310
Helix 45
AE9
B
397 408Right-handed alpha
Helix 46
AF1
B
419 429Right-handed alpha
Helix 47
AF2
B
435 448Right-handed alpha
Helix 48
AF3
B
488 498Right-handed alpha
Helix 49
AF4
B
517 532Right-handed alpha
Helix 50
AF5
E
15 22Right-handed alpha
Helix 51
AF6
E
46 54Right-handed alpha
Helix 52
AF7
E
65 77Right-handed alpha
Helix 53
AF8
E
94 107Right-handed alpha
Helix 54
AF9
E
118 134Right-handed alpha
Helix 55
AG1
E
138 152Right-handed alpha
Helix 56
AG2
E
162 169Right-handed alpha
Helix 57
AG3
E
204 219Right-handed alpha
Helix 58
AG4
E
234 245Right-handed alpha
Helix 59
AG5
E
246 248Right-handed 310
Helix 60
AG6
E
258 266Right-handed alpha
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There are 11 sheets in PDB entry 7W7H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
274 281first strand
Strand 2
A
285 292anti-parallel
Strand 3
A
243 251anti-parallel
Strand 4
A
306 315anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
361 364first strand
Strand 2
A
337 345parallel
Strand 3
A
385 391parallel
Strand 4
A
411 414parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
481 486first strand
Strand 2
A
474 478anti-parallel
Strand 3
A
451 457anti-parallel
Strand 4
A
549 554anti-parallel
Strand 5
A
507 512anti-parallel
Strand 6
A
536 541parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
462 464first strand
Strand 2
A
467 469anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
274 281first strand
Strand 2
B
285 292anti-parallel
Strand 3
B
243 251anti-parallel
Strand 4
B
306 315anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
361 364first strand
Strand 2
B
337 345parallel
Strand 3
B
385 391parallel
Strand 4
B
411 414parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
481 486first strand
Strand 2
B
474 478anti-parallel
Strand 3
B
451 457anti-parallel
Strand 4
B
549 554anti-parallel
Strand 5
B
507 512anti-parallel
Strand 6
B
536 541parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
462 464first strand
Strand 2
B
467 469anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
24 27first strand
Strand 2
E
4 9parallel
Strand 3
E
82 87parallel
Strand 4
E
110 114parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
36 39first strand
Strand 2
E
30 33anti-parallel
Strand 3
E
60 62anti-parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
194 201first strand
Strand 2
E
185 191anti-parallel
Strand 3
E
153 159anti-parallel
Strand 4
E
270 276anti-parallel
Strand 5
E
223 230anti-parallel
Strand 6
E
253 256parallel
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