Analysis of interatomic Contacts of Structural Units in PDB entry:
7W7P

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7W7P entry

There are 6 chains in PDB entry 7W7P (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 2	ASN 273
B	PRO 15	LYS 308
C	ALA 2	ASN 273
D	PRO 15	LYS 308
E	ALA 2	ASN 273
F	PRO 15	LYS 308

There are 51 helices in PDB entry 7W7P. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	4	23	Right-handed alpha
Helix 2	AA2	A	23	33	Right-handed alpha
Helix 3	AA3	A	46	53	Right-handed alpha
Helix 4	AA4	A	53	63	Right-handed alpha
Helix 5	AA5	A	63	86	Right-handed alpha
Helix 6	AA6	A	118	122	Right-handed 310
Helix 7	AA7	A	187	192	Right-handed alpha
Helix 8	AA8	A	229	231	Right-handed 310
Helix 9	AA9	B	31	48	Right-handed alpha
Helix 10	AB1	B	52	60	Right-handed alpha
Helix 11	AB2	B	66	70	Right-handed alpha
Helix 12	AB3	B	73	79	Right-handed alpha
Helix 13	AB4	B	81	89	Right-handed alpha
Helix 14	AB5	B	89	121	Right-handed alpha
Helix 15	AB6	B	152	156	Right-handed 310
Helix 16	AB7	B	259	261	Right-handed 310
Helix 17	AB8	C	4	23	Right-handed alpha
Helix 18	AB9	C	23	33	Right-handed alpha
Helix 19	AC1	C	46	53	Right-handed alpha
Helix 20	AC2	C	53	63	Right-handed alpha
Helix 21	AC3	C	63	86	Right-handed alpha
Helix 22	AC4	C	118	122	Right-handed 310
Helix 23	AC5	C	161	165	Right-handed 310
Helix 24	AC6	C	179	184	Right-handed alpha
Helix 25	AC7	C	187	192	Right-handed alpha
Helix 26	AC8	C	227	231	Right-handed 310
Helix 27	AC9	D	31	48	Right-handed alpha
Helix 28	AD1	D	52	60	Right-handed alpha
Helix 29	AD2	D	66	70	Right-handed alpha
Helix 30	AD3	D	73	79	Right-handed alpha
Helix 31	AD4	D	81	89	Right-handed alpha
Helix 32	AD5	D	89	121	Right-handed alpha
Helix 33	AD6	D	259	261	Right-handed 310
Helix 34	AD7	E	4	23	Right-handed alpha
Helix 35	AD8	E	23	33	Right-handed alpha
Helix 36	AD9	E	46	53	Right-handed alpha
Helix 37	AE1	E	53	63	Right-handed alpha
Helix 38	AE2	E	63	86	Right-handed alpha
Helix 39	AE3	E	118	122	Right-handed 310
Helix 40	AE4	E	179	184	Right-handed alpha
Helix 41	AE5	E	187	192	Right-handed alpha
Helix 42	AE6	E	229	231	Right-handed 310
Helix 43	AE7	F	18	23	Right-handed alpha
Helix 44	AE8	F	32	48	Right-handed alpha
Helix 45	AE9	F	52	60	Right-handed alpha
Helix 46	AF1	F	66	70	Right-handed alpha
Helix 47	AF2	F	73	79	Right-handed alpha
Helix 48	AF3	F	81	89	Right-handed alpha
Helix 49	AF4	F	89	121	Right-handed alpha
Helix 50	AF5	F	152	156	Right-handed 310
Helix 51	AF6	F	259	261	Right-handed 310

There are 21 sheets in PDB entry 7W7P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	40	41	first strand
Strand 2	A	98	99	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	44	45	first strand
Strand 2	A	102	103	parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	125	135	first strand
Strand 2	A	201	208	anti-parallel
Strand 3	A	221	227	anti-parallel
Strand 4	A	261	272	parallel
Strand 5	A	239	250	anti-parallel
Strand 6	A	125	135	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	61	65	first strand
Strand 2	B	136	140	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	189	193	first strand
Strand 2	B	173	182	anti-parallel
Strand 3	B	225	236	anti-parallel
Strand 4	B	216	217	first strand

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	189	193	first strand
Strand 2	B	173	182	anti-parallel
Strand 3	B	251	257	first strand
Strand 4	B	296	305	parallel
Strand 5	B	269	279	anti-parallel
Strand 6	B	159	169	anti-parallel
Strand 7	B	225	236	anti-parallel
Strand 8	B	216	217	first strand

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	40	41	first strand
Strand 2	C	98	99	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	44	45	first strand
Strand 2	C	102	103	parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	125	135	first strand
Strand 2	C	202	208	anti-parallel
Strand 3	C	221	226	anti-parallel
Strand 4	C	261	272	parallel
Strand 5	C	239	250	anti-parallel
Strand 6	C	125	135	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	144	147	first strand
Strand 2	C	156	159	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	61	65	first strand
Strand 2	D	136	140	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	189	193	first strand
Strand 2	D	173	182	anti-parallel
Strand 3	D	225	236	anti-parallel
Strand 4	D	216	217	first strand

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	189	193	first strand
Strand 2	D	173	182	anti-parallel
Strand 3	D	251	257	first strand
Strand 4	D	297	305	parallel
Strand 5	D	269	278	anti-parallel
Strand 6	D	164	169	anti-parallel
Strand 7	D	225	236	anti-parallel
Strand 8	D	216	217	first strand

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	40	41	first strand
Strand 2	E	98	99	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	44	45	first strand
Strand 2	E	102	103	parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	125	135	first strand
Strand 2	E	201	208	anti-parallel
Strand 3	E	221	227	anti-parallel
Strand 4	E	261	272	parallel
Strand 5	E	239	250	anti-parallel
Strand 6	E	125	135	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	141	144	first strand
Strand 2	E	197	199	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	160	161	first strand
Strand 2	E	167	168	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	61	65	first strand
Strand 2	F	136	140	parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	189	193	first strand
Strand 2	F	173	182	anti-parallel
Strand 3	F	225	236	anti-parallel
Strand 4	F	216	217	first strand

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There are 8 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	189	193	first strand
Strand 2	F	173	182	anti-parallel
Strand 3	F	252	257	first strand
Strand 4	F	297	306	parallel
Strand 5	F	269	278	anti-parallel
Strand 6	F	159	169	anti-parallel
Strand 7	F	225	236	anti-parallel
Strand 8	F	216	217	first strand

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7W7P

Analysis of interatomic Contacts of Structural Units in PDB entry:
7W7P