Analysis of interatomic Contacts of Structural Units in PDB entry:
7W7W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7W7W entry

There is 1 chain in PDB entry 7W7W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 1042
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 40 helices in PDB entry 7W7W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 17Right-handed alpha
Helix 2
AA2
A
25 37Right-handed alpha
Helix 3
AA3
A
48 57Right-handed alpha
Helix 4
AA4
A
59 79Right-handed alpha
Helix 5
AA5
A
84 87Right-handed 310
Helix 6
AA6
A
88 110Right-handed alpha
Helix 7
AA7
A
141 145Right-handed 310
Helix 8
AA8
A
177 182Right-handed alpha
Helix 9
AA9
A
226 229Right-handed 310
Helix 10
AB1
A
230 241Right-handed alpha
Helix 11
AB2
A
247 279Right-handed alpha
Helix 12
AB3
A
286 307Right-handed alpha
Helix 13
AB4
A
309 329Right-handed alpha
Helix 14
AB5
A
339 343Right-handed 310
Helix 15
AB6
A
407 420Right-handed alpha
Helix 16
AB7
A
439 452Right-handed alpha
Helix 17
AB8
A
463 468Right-handed alpha
Helix 18
AB9
A
469 478Right-handed alpha
Helix 19
AC1
A
516 523Right-handed alpha
Helix 20
AC2
A
537 553Right-handed alpha
Helix 21
AC3
A
580 587Right-handed alpha
Helix 22
AC4
A
605 616Right-handed alpha
Helix 23
AC5
A
627 638Right-handed alpha
Helix 24
AC6
A
654 659Right-handed alpha
Helix 25
AC7
A
661 672Right-handed alpha
Helix 26
AC8
A
679 693Right-handed alpha
Helix 27
AC9
A
706 713Right-handed alpha
Helix 28
AD1
A
723 729Right-handed alpha
Helix 29
AD2
A
739 781Right-handed alpha
Helix 30
AD3
A
787 808Right-handed alpha
Helix 31
AD4
A
829 857Right-handed alpha
Helix 32
AD5
A
866 870Right-handed 310
Helix 33
AD6
A
886 891Right-handed 310
Helix 34
AD7
A
892 913Right-handed alpha
Helix 35
AD8
A
925 928Right-handed 310
Helix 36
AD9
A
929 949Right-handed alpha
Helix 37
AE1
A
951 956Right-handed alpha
Helix 38
AE2
A
962 974Right-handed alpha
Helix 39
AE3
A
974 989Right-handed alpha
Helix 40
AE4
A
1016 1031Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 7W7W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 153first strand
Strand 2
A
219 225anti-parallel
Strand 3
A
162 168anti-parallel
Strand 4
A
207 208anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 188first strand
Strand 2
A
174 176anti-parallel
Strand 3
A
214 216anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
331 333first strand
Strand 2
A
732 734anti-parallel
Strand 3
A
715 719parallel
Strand 4
A
697 701parallel
Strand 5
A
347 350parallel
Strand 6
A
619 623parallel
Strand 7
A
674 676parallel
Strand 8
A
651 653parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
395 396first strand
Strand 2
A
376 384anti-parallel
Strand 3
A
362 373anti-parallel
Strand 4
A
590 599anti-parallel
Strand 5
A
559 566anti-parallel
Strand 6
A
510 515anti-parallel
Strand 7
A
493 500anti-parallel
Strand 8
A
479 485anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
395 396first strand
Strand 2
A
376 384anti-parallel
Strand 3
A
362 373anti-parallel
Strand 4
A
590 599anti-parallel
Strand 5
A
524 529parallel
Strand 6
A
532 535anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
425 427first strand
Strand 2
A
434 436anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il