Analysis of interatomic Contacts of Structural Units in PDB entry:
7W80


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7W80 entry

There are 2 chains in PDB entry 7W80 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 101VAL 464
B
 GLU 30THR 359
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 7W80. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
102 115Right-handed alpha
Helix 2
AA2
A
127 142Right-handed alpha
Helix 3
AA3
A
160 173Right-handed alpha
Helix 4
AA4
A
192 198Right-handed alpha
Helix 5
AA5
A
200 205Right-handed alpha
Helix 6
AA6
A
208 213Right-handed 310
Helix 7
AA7
A
214 216Right-handed 310
Helix 8
AA8
A
217 226Right-handed alpha
Helix 9
AA9
A
379 384Right-handed alpha
Helix 10
AB1
A
387 392Right-handed alpha
Helix 11
AB2
A
395 400Right-handed 310
Helix 12
AB3
A
401 403Right-handed 310
Helix 13
AB4
A
404 418Right-handed alpha
Helix 14
AB5
B
30 35Right-handed 310
Helix 15
AB6
B
54 74Right-handed alpha
Helix 16
AB7
B
89 95Right-handed alpha
Helix 17
AB8
B
114 120Right-handed alpha
Helix 18
AB9
B
122 127Right-handed alpha
Helix 19
AC1
B
130 135Right-handed 310
Helix 20
AC2
B
136 138Right-handed 310
Helix 21
AC3
B
139 148Right-handed alpha
Helix 22
AC4
B
259 265Right-handed alpha
Helix 23
AC5
B
268 272Right-handed 310
Helix 24
AC6
B
276 280Right-handed 310
Helix 25
AC7
B
285 300Right-handed alpha
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There are 5 sheets in PDB entry 7W80. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 189first strand
Strand 2
A
174 180anti-parallel
Strand 3
A
335 343anti-parallel
Strand 4
A
303 314anti-parallel
Strand 5
A
260 268anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 376first strand
Strand 2
A
362 367anti-parallel
Strand 3
A
454 463anti-parallel
Strand 4
A
437 447anti-parallel
Strand 5
A
423 429anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
110 111first strand
Strand 2
B
98 103anti-parallel
Strand 3
B
219 228anti-parallel
Strand 4
B
189 202anti-parallel
Strand 5
B
165 174anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
254 257first strand
Strand 2
B
243 248anti-parallel
Strand 3
B
333 343anti-parallel
Strand 4
B
316 328anti-parallel
Strand 5
B
301 303anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
254 257first strand
Strand 2
B
243 248anti-parallel
Strand 3
B
333 343anti-parallel
Strand 4
B
316 328anti-parallel
Strand 5
B
307 310anti-parallel
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