Analysis of interatomic Contacts of Structural Units in PDB entry:
7W83


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7W83 entry

There are 2 chains in PDB entry 7W83 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 23PRO 222
B
 THR 24PRO 222
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 7W83. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
85 90Right-handed alpha
Helix 2
AA2
A
121 126Right-handed 310
Helix 3
AA3
B
85 90Right-handed alpha
Helix 4
AA4
B
121 126Right-handed 310
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There are 4 sheets in PDB entry 7W83. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 116first strand
Strand 2
A
26 32anti-parallel
Strand 3
A
50 62anti-parallel
Strand 4
A
41 45anti-parallel
Strand 5
A
93 98anti-parallel
Strand 6
A
182 193anti-parallel
Strand 7
A
168 179anti-parallel
Strand 8
A
151 155anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 138first strand
Strand 2
A
168 179parallel
Strand 3
A
182 193anti-parallel
Strand 4
A
93 98anti-parallel
Strand 5
A
41 45anti-parallel
Strand 6
A
50 62anti-parallel
Strand 7
A
65 75anti-parallel
Strand 8
A
205 217anti-parallel
Strand 9
A
158 161anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
114 116first strand
Strand 2
B
26 32anti-parallel
Strand 3
B
50 62anti-parallel
Strand 4
B
41 45anti-parallel
Strand 5
B
93 98anti-parallel
Strand 6
B
182 193anti-parallel
Strand 7
B
168 179anti-parallel
Strand 8
B
151 155anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
137 138first strand
Strand 2
B
168 179parallel
Strand 3
B
182 193anti-parallel
Strand 4
B
93 98anti-parallel
Strand 5
B
41 45anti-parallel
Strand 6
B
50 62anti-parallel
Strand 7
B
65 75anti-parallel
Strand 8
B
205 217anti-parallel
Strand 9
B
158 161anti-parallel
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