Analysis of interatomic Contacts of Structural Units in PDB entry:
7W84


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7W84 entry

There is 1 chain in PDB entry 7W84 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 106ALA 1119
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 7W84. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
141 143Right-handed 310
Helix 2
AA2
A
229 234Right-handed alpha
Helix 3
AA3
A
290 303Right-handed alpha
Helix 4
AA4
A
312 322Right-handed alpha
Helix 5
AA5
A
323 335Right-handed alpha
Helix 6
AA6
A
343 359Right-handed alpha
Helix 7
AA7
A
395 401Right-handed alpha
Helix 8
AA8
A
422 426Right-handed 310
Helix 9
AA9
A
430 434Right-handed 310
Helix 10
AB1
A
441 453Right-handed alpha
Helix 11
AB2
A
468 474Right-handed alpha
Helix 12
AB3
A
487 496Right-handed alpha
Helix 13
AB4
A
503 513Right-handed alpha
Helix 14
AB5
A
554 564Right-handed alpha
Helix 15
AB6
A
627 636Right-handed alpha
Helix 16
AB7
A
640 658Right-handed alpha
Helix 17
AB8
A
661 671Right-handed alpha
Helix 18
AB9
A
674 686Right-handed alpha
Helix 19
AC1
A
693 715Right-handed alpha
Helix 20
AC2
A
747 751Right-handed 310
Helix 21
AC3
A
794 800Right-handed alpha
Helix 22
AC4
A
816 820Right-handed 310
Helix 23
AC5
A
862 877Right-handed alpha
Helix 24
AC6
A
878 892Right-handed alpha
Helix 25
AC7
A
899 913Right-handed alpha
Helix 26
AC8
A
914 916Right-handed 310
Helix 27
AC9
A
934 938Right-handed 310
Helix 28
AD1
A
949 966Right-handed alpha
Helix 29
AD2
A
991 1012Right-handed alpha
Helix 30
AD3
A
1016 1023Right-handed alpha
Helix 31
AD4
A
1029 1034Right-handed alpha
Helix 32
AD5
A
1036 1064Right-handed alpha
Helix 33
AD6
A
1065 1067Right-handed 310
Helix 34
AD7
A
1068 1082Right-handed alpha
Helix 35
AD8
A
1094 1097Right-handed 310
Helix 36
AD9
A
1098 1103Right-handed alpha
Helix 37
AE1
A
1103 1110Right-handed alpha
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There are 8 sheets in PDB entry 7W84. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 183first strand
Strand 2
A
236 238anti-parallel
Strand 3
A
111 120anti-parallel
Strand 4
A
126 140anti-parallel
Strand 5
A
145 152anti-parallel
Strand 6
A
155 162anti-parallel
Strand 7
A
189 192anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 374first strand
Strand 2
A
390 392anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
384 386first strand
Strand 2
A
377 379anti-parallel
Strand 3
A
409 412parallel
Strand 4
A
477 480anti-parallel
Strand 5
A
460 466anti-parallel
Strand 6
A
455 457anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
536 538first strand
Strand 2
A
543 545anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
550 553first strand
Strand 2
A
583 589parallel
Strand 3
A
575 580anti-parallel
Strand 4
A
617 618anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
625 626first strand
Strand 2
A
717 718anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
739 740first strand
Strand 2
A
787 791parallel
Strand 3
A
773 776anti-parallel
Strand 4
A
829 833anti-parallel
Strand 5
A
722 729anti-parallel
Strand 6
A
806 808parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
744 745first strand
Strand 2
A
766 769anti-parallel
Strand 3
A
759 762anti-parallel
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