Analysis of interatomic Contacts of Structural Units in PDB entry:
7W8L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7W8L entry

There are 4 chains in PDB entry 7W8L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 MET 1THR 228
A
 THR 2LEU 110
A
 SER 112SER 112
A
 TYR 114VAL 204
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 7W8L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
27 41Right-handed alpha
Helix 2
AA2
B
47 57Right-handed alpha
Helix 3
AA3
B
59 66Right-handed alpha
Helix 4
AA4
B
67 83Right-handed alpha
Helix 5
AA5
B
87 101Right-handed alpha
Helix 6
AA6
B
112 126Right-handed alpha
Helix 7
AA7
B
159 163Right-handed 310
Helix 8
AA8
B
178 183Right-handed alpha
Helix 9
AA9
B
200 205Right-handed alpha
Helix 10
AB1
B
206 208Right-handed 310
Helix 11
AB2
A
9 31Right-handed alpha
Helix 12
AB3
A
35 49Right-handed alpha
Helix 13
AB4
A
51 65Right-handed alpha
Helix 14
AB5
A
65 75Right-handed alpha
Helix 15
AB6
A
75 82Right-handed alpha
Helix 16
AB7
A
115 120Right-handed alpha
Helix 17
AB8
A
123 128Right-handed alpha
Helix 18
AB9
A
128 136Right-handed alpha
Helix 19
AC1
A
138 148Right-handed alpha
Helix 20
AC2
A
182 188Right-handed alpha
Helix 21
AC3
A
191 197Right-handed alpha
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There are 3 sheets in PDB entry 7W8L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
130 131first strand
Strand 2
B
166 176anti-parallel
Strand 3
B
144 147anti-parallel
Strand 4
B
223 227anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
130 131first strand
Strand 2
B
166 176anti-parallel
Strand 3
B
191 199anti-parallel
Strand 4
B
212 219anti-parallel
Strand 5
A
156 161parallel
Strand 6
A
102 107parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 97first strand
Strand 2
A
166 171parallel
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