Analysis of interatomic Contacts of Structural Units in PDB entry:
7W8V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7W8V entry

There is 1 chain in PDB entry 7W8V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 17ARG 374
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 7W8V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 40Right-handed alpha
Helix 2
AA2
A
43 59Right-handed alpha
Helix 3
AA3
A
60 64Right-handed 310
Helix 4
AA4
A
109 129Right-handed alpha
Helix 5
AA5
A
132 137Right-handed alpha
Helix 6
AA6
A
138 143Right-handed alpha
Helix 7
AA7
A
177 179Right-handed 310
Helix 8
AA8
A
180 192Right-handed alpha
Helix 9
AA9
A
197 201Right-handed 310
Helix 10
AB1
A
233 240Right-handed alpha
Helix 11
AB2
A
248 260Right-handed alpha
Helix 12
AB3
A
296 300Right-handed 310
Helix 13
AB4
A
303 318Right-handed alpha
Helix 14
AB5
A
321 333Right-handed alpha
Helix 15
AB6
A
336 340Right-handed 310
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There is 1 sheet (AA1) in PDB entry 7W8V.

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 89first strand
Strand 2
A
96 101anti-parallel
Strand 3
A
153 158anti-parallel
Strand 4
A
166 171anti-parallel
Strand 5
A
210 214anti-parallel
Strand 6
A
222 232anti-parallel
Strand 7
A
271 280anti-parallel
Strand 8
A
290 295anti-parallel
Strand 9
A
344 352anti-parallel
Strand 10
A
358 364anti-parallel
Strand 11
A
83 89anti-parallel
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