Analysis of interatomic Contacts of Structural Units in PDB entry:
7W9I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7W9I entry

There are 2 chains in PDB entry 7W9I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 19ASP 615
E
 THR 333GLY 526
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 7W9I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 34Right-handed alpha
Helix 2
AA2
A
36 53Right-handed alpha
Helix 3
AA3
A
57 80Right-handed alpha
Helix 4
AA4
A
81 83Right-handed 310
Helix 5
AA5
A
90 99Right-handed alpha
Helix 6
AA6
A
103 108Right-handed 310
Helix 7
AA7
A
109 129Right-handed alpha
Helix 8
AA8
A
147 152Right-handed alpha
Helix 9
AA9
A
158 167Right-handed alpha
Helix 10
AB1
A
176 193Right-handed alpha
Helix 11
AB2
A
199 204Right-handed alpha
Helix 12
AB3
A
220 248Right-handed alpha
Helix 13
AB4
A
265 267Right-handed 310
Helix 14
AB5
A
275 279Right-handed 310
Helix 15
AB6
A
293 297Right-handed 310
Helix 16
AB7
A
303 319Right-handed alpha
Helix 17
AB8
A
324 331Right-handed alpha
Helix 18
AB9
A
368 378Right-handed alpha
Helix 19
AC1
A
378 383Right-handed alpha
Helix 20
AC2
A
384 388Right-handed 310
Helix 21
AC3
A
389 393Right-handed 310
Helix 22
AC4
A
400 405Right-handed alpha
Helix 23
AC5
A
431 444Right-handed alpha
Helix 24
AC6
A
449 464Right-handed alpha
Helix 25
AC7
A
474 482Right-handed alpha
Helix 26
AC8
A
499 502Right-handed 310
Helix 27
AC9
A
503 508Right-handed alpha
Helix 28
AD1
A
512 515Right-handed 310
Helix 29
AD2
A
516 533Right-handed alpha
Helix 30
AD3
A
538 542Right-handed 310
Helix 31
AD4
A
547 559Right-handed alpha
Helix 32
AD5
A
565 574Right-handed alpha
Helix 33
AD6
A
581 588Right-handed alpha
Helix 34
AD7
A
588 598Right-handed alpha
Helix 35
AD8
E
349 353Right-handed 310
Helix 36
AD9
E
365 370Right-handed alpha
Helix 37
AE1
E
385 389Right-handed 310
Helix 38
AE2
E
438 443Right-handed alpha
Helix 39
AE3
E
502 506Right-handed 310
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There are 6 sheets in PDB entry 7W9I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 133first strand
Strand 2
A
141 142anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 263first strand
Strand 2
A
487 488parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 352first strand
Strand 2
A
355 359anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
354 358first strand
Strand 2
E
394 402anti-parallel
Strand 3
E
508 516anti-parallel
Strand 4
E
432 437anti-parallel
Strand 5
E
376 379anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
452 454first strand
Strand 2
E
492 494anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
473 474first strand
Strand 2
E
488 489anti-parallel
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