Analysis of interatomic Contacts of Structural Units in PDB entry:
7W9L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7W9L entry

There are 3 chains in PDB entry 7W9L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 8VAL 1891
B
 GLY 20ALA 192
C
 MET 30MET 148
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 75 helices in PDB entry 7W9L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 32Right-handed alpha
Helix 2
AA2
A
60 64Right-handed 310
Helix 3
AA3
A
79 84Right-handed 310
Helix 4
AA4
A
104 108Right-handed 310
Helix 5
AA5
A
113 124Right-handed alpha
Helix 6
AA6
A
126 145Right-handed alpha
Helix 7
AA7
A
151 175Right-handed alpha
Helix 8
AA8
A
186 205Right-handed alpha
Helix 9
AA9
A
209 217Right-handed alpha
Helix 10
AB1
A
218 221Right-handed 310
Helix 11
AB2
A
222 228Right-handed alpha
Helix 12
AB3
A
231 243Right-handed alpha
Helix 13
AB4
A
246 267Right-handed alpha
Helix 14
AB5
A
285 292Right-handed alpha
Helix 15
AB6
A
298 303Right-handed alpha
Helix 16
AB7
A
346 360Right-handed alpha
Helix 17
AB8
A
362 374Right-handed alpha
Helix 18
AB9
A
375 377Right-handed 310
Helix 19
AC1
A
378 388Right-handed alpha
Helix 20
AC2
A
388 435Right-handed alpha
Helix 21
AC3
A
729 741Right-handed alpha
Helix 22
AC4
A
742 762Right-handed alpha
Helix 23
AC5
A
769 798Right-handed alpha
Helix 24
AC6
A
799 806Right-handed alpha
Helix 25
AC7
A
806 826Right-handed alpha
Helix 26
AC8
A
836 848Right-handed 310
Helix 27
AC9
A
851 863Right-handed alpha
Helix 28
AD1
A
866 888Right-handed alpha
Helix 29
AD2
A
888 900Right-handed alpha
Helix 30
AD3
A
912 925Right-handed alpha
Helix 31
AD4
A
928 972Right-handed alpha
Helix 32
AD5
A
973 975Right-handed 310
Helix 33
AD6
A
986 1014Right-handed alpha
Helix 34
AD7
A
1176 1191Right-handed alpha
Helix 35
AD8
A
1191 1211Right-handed alpha
Helix 36
AD9
A
1214 1218Right-handed 310
Helix 37
AE1
A
1221 1249Right-handed alpha
Helix 38
AE2
A
1249 1256Right-handed alpha
Helix 39
AE3
A
1256 1279Right-handed alpha
Helix 40
AE4
A
1284 1293Right-handed alpha
Helix 41
AE5
A
1294 1303Right-handed 310
Helix 42
AE6
A
1304 1343Right-handed alpha
Helix 43
AE7
A
1366 1377Right-handed alpha
Helix 44
AE8
A
1391 1404Right-handed alpha
Helix 45
AE9
A
1407 1417Right-handed alpha
Helix 46
AF1
A
1430 1432Right-handed 310
Helix 47
AF2
A
1433 1447Right-handed alpha
Helix 48
AF3
A
1447 1467Right-handed alpha
Helix 49
AF4
A
1475 1489Right-handed alpha
Helix 50
AF5
A
1502 1514Right-handed alpha
Helix 51
AF6
A
1514 1533Right-handed alpha
Helix 52
AF7
A
1540 1570Right-handed alpha
Helix 53
AF8
A
1571 1575Right-handed 310
Helix 54
AF9
A
1576 1602Right-handed alpha
Helix 55
AG1
A
1605 1614Right-handed alpha
Helix 56
AG2
A
1617 1622Right-handed alpha
Helix 57
AG3
A
1623 1626Right-handed 310
Helix 58
AG4
A
1627 1666Right-handed alpha
Helix 59
AG5
A
1683 1696Right-handed alpha
Helix 60
AG6
A
1699 1708Right-handed alpha
Helix 61
AG7
A
1732 1768Right-handed alpha
Helix 62
AG8
A
1776 1790Right-handed alpha
Helix 63
AG9
A
1799 1806Right-handed alpha
Helix 64
AH1
A
1819 1824Right-handed alpha
Helix 65
AH2
A
1825 1827Right-handed 310
Helix 66
AH3
A
1838 1851Right-handed alpha
Helix 67
AH4
A
1853 1869Right-handed alpha
Helix 68
AH5
A
1873 1877Right-handed 310
Helix 69
AH6
A
1883 1891Right-handed alpha
Helix 70
AH7
B
83 87Right-handed 310
Helix 71
AH8
B
112 115Right-handed 310
Helix 72
AH9
B
153 192Right-handed alpha
Helix 73
AI1
C
92 96Right-handed 310
Helix 74
AI2
C
104 108Right-handed 310
Helix 75
AI3
C
118 122Right-handed 310
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There are 11 sheets in PDB entry 7W9L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 76first strand
Strand 2
A
88 89anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 276first strand
Strand 2
A
329 332anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1349 1352first strand
Strand 2
A
1380 1383anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1796 1798first strand
Strand 2
A
1835 1837anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1829 1831first strand
Strand 2
A
1879 1882anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 31first strand
Strand 2
B
139 147parallel
Strand 3
B
117 124anti-parallel
Strand 4
B
54 61anti-parallel
Strand 5
B
68 73anti-parallel
Strand 6
B
78 80anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 38first strand
Strand 2
B
106 108anti-parallel
Strand 3
B
91 92anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
50 51first strand
Strand 2
B
127 128anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
32 33first strand
Strand 2
C
51 52anti-parallel
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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
37 41first strand
Strand 2
C
138 147parallel
Strand 3
C
123 130anti-parallel
Strand 4
C
64 70anti-parallel
Strand 5
C
78 84anti-parallel
Strand 6
C
87 89anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
46 48first strand
Strand 2
C
112 114anti-parallel
Strand 3
C
99 101anti-parallel
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