Analysis of interatomic Contacts of Structural Units in PDB entry:
7W9M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7W9M entry

There are 3 chains in PDB entry 7W9M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 8VAL 1891
B
 GLY 20ALA 192
C
 MET 30MET 148
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 74 helices in PDB entry 7W9M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 34Right-handed alpha
Helix 2
AA2
A
50 54Right-handed 310
Helix 3
AA3
A
60 64Right-handed 310
Helix 4
AA4
A
79 84Right-handed alpha
Helix 5
AA5
A
104 108Right-handed 310
Helix 6
AA6
A
113 124Right-handed alpha
Helix 7
AA7
A
125 144Right-handed alpha
Helix 8
AA8
A
151 175Right-handed alpha
Helix 9
AA9
A
182 185Right-handed 310
Helix 10
AB1
A
186 205Right-handed alpha
Helix 11
AB2
A
213 217Right-handed 310
Helix 12
AB3
A
218 223Right-handed alpha
Helix 13
AB4
A
224 227Right-handed 310
Helix 14
AB5
A
230 244Right-handed alpha
Helix 15
AB6
A
245 268Right-handed alpha
Helix 16
AB7
A
285 291Right-handed alpha
Helix 17
AB8
A
295 300Right-handed alpha
Helix 18
AB9
A
337 341Right-handed 310
Helix 19
AC1
A
346 359Right-handed alpha
Helix 20
AC2
A
362 375Right-handed alpha
Helix 21
AC3
A
378 389Right-handed alpha
Helix 22
AC4
A
389 435Right-handed alpha
Helix 23
AC5
A
729 738Right-handed alpha
Helix 24
AC6
A
739 741Right-handed 310
Helix 25
AC7
A
745 763Right-handed alpha
Helix 26
AC8
A
769 804Right-handed alpha
Helix 27
AC9
A
806 825Right-handed alpha
Helix 28
AD1
A
831 838Right-handed alpha
Helix 29
AD2
A
839 845Right-handed 310
Helix 30
AD3
A
849 864Right-handed alpha
Helix 31
AD4
A
866 895Right-handed alpha
Helix 32
AD5
A
912 925Right-handed alpha
Helix 33
AD6
A
928 939Right-handed alpha
Helix 34
AD7
A
940 977Right-handed alpha
Helix 35
AD8
A
986 1014Right-handed alpha
Helix 36
AD9
A
1176 1189Right-handed alpha
Helix 37
AE1
A
1191 1208Right-handed alpha
Helix 38
AE2
A
1209 1212Right-handed 310
Helix 39
AE3
A
1219 1254Right-handed alpha
Helix 40
AE4
A
1256 1279Right-handed alpha
Helix 41
AE5
A
1284 1291Right-handed alpha
Helix 42
AE6
A
1292 1301Right-handed 310
Helix 43
AE7
A
1304 1344Right-handed alpha
Helix 44
AE8
A
1366 1377Right-handed alpha
Helix 45
AE9
A
1391 1404Right-handed alpha
Helix 46
AF1
A
1407 1417Right-handed alpha
Helix 47
AF2
A
1433 1445Right-handed alpha
Helix 48
AF3
A
1446 1467Right-handed alpha
Helix 49
AF4
A
1475 1487Right-handed alpha
Helix 50
AF5
A
1502 1513Right-handed alpha
Helix 51
AF6
A
1514 1534Right-handed alpha
Helix 52
AF7
A
1541 1569Right-handed alpha
Helix 53
AF8
A
1576 1603Right-handed alpha
Helix 54
AF9
A
1605 1614Right-handed alpha
Helix 55
AG1
A
1615 1626Right-handed 310
Helix 56
AG2
A
1629 1666Right-handed alpha
Helix 57
AG3
A
1667 1669Right-handed 310
Helix 58
AG4
A
1683 1696Right-handed alpha
Helix 59
AG5
A
1699 1709Right-handed alpha
Helix 60
AG6
A
1732 1751Right-handed alpha
Helix 61
AG7
A
1752 1767Right-handed alpha
Helix 62
AG8
A
1778 1790Right-handed alpha
Helix 63
AG9
A
1799 1806Right-handed alpha
Helix 64
AH1
A
1819 1825Right-handed alpha
Helix 65
AH2
A
1838 1851Right-handed alpha
Helix 66
AH3
A
1853 1869Right-handed alpha
Helix 67
AH4
A
1873 1877Right-handed 310
Helix 68
AH5
A
1883 1891Right-handed alpha
Helix 69
AH6
B
83 87Right-handed 310
Helix 70
AH7
B
112 115Right-handed 310
Helix 71
AH8
B
153 192Right-handed alpha
Helix 72
AH9
C
92 96Right-handed 310
Helix 73
AI1
C
104 108Right-handed 310
Helix 74
AI2
C
118 122Right-handed 310
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There are 10 sheets in PDB entry 7W9M. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 76first strand
Strand 2
A
88 91anti-parallel
Strand 3
A
97 99anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 277first strand
Strand 2
A
328 332anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1357 1358first strand
Strand 2
A
1349 1352anti-parallel
Strand 3
A
1380 1383anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1796 1798first strand
Strand 2
A
1835 1837anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1829 1831first strand
Strand 2
A
1879 1882anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 31first strand
Strand 2
B
133 147parallel
Strand 3
B
117 128anti-parallel
Strand 4
B
50 61anti-parallel
Strand 5
B
68 74anti-parallel
Strand 6
B
77 80anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 38first strand
Strand 2
B
106 108anti-parallel
Strand 3
B
90 92anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
32 33first strand
Strand 2
C
51 52anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
37 41first strand
Strand 2
C
138 147parallel
Strand 3
C
123 130anti-parallel
Strand 4
C
64 70anti-parallel
Strand 5
C
78 84anti-parallel
Strand 6
C
87 89anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
46 48first strand
Strand 2
C
112 114anti-parallel
Strand 3
C
99 101anti-parallel
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