Analysis of interatomic Contacts of Structural Units in PDB entry:
7WAT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WAT entry

There is 1 chain in PDB entry 7WAT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
GLU 94HIS 875
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 7WAT. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
B
100 116Right-handed alpha
Helix 2
AA2
B
125 133Right-handed alpha
Helix 3
AA3
B
146 156Right-handed alpha
Helix 4
AA4
B
170 188Right-handed alpha
Helix 5
AA5
B
191 206Right-handed alpha
Helix 6
AA6
B
207 209Right-handed 310
Helix 7
AA7
B
219 234Right-handed alpha
Helix 8
AA8
B
242 258Right-handed alpha
Helix 9
AA9
B
259 261Right-handed 310
Helix 10
AB1
B
262 267Right-handed alpha
Helix 11
AB2
B
269 279Right-handed 310
Helix 12
AB3
B
284 289Right-handed alpha
Helix 13
AB4
B
290 292Right-handed 310
Helix 14
AB5
B
301 313Right-handed alpha
Helix 15
AB6
B
314 328Right-handed alpha
Helix 16
AB7
B
338 353Right-handed alpha
Helix 17
AB8
B
355 358Right-handed 310
Helix 18
AB9
B
359 372Right-handed alpha
Helix 19
AC1
B
389 403Right-handed alpha
Helix 20
AC2
B
408 414Right-handed 310
Helix 21
AC3
B
432 444Right-handed alpha
Helix 22
AC4
B
450 466Right-handed alpha
Helix 23
AC5
B
467 472Right-handed 310
Helix 24
AC6
B
480 491Right-handed alpha
Helix 25
AC7
B
492 496Right-handed 310
Helix 26
AC8
B
497 509Right-handed alpha
Helix 27
AC9
B
528 545Right-handed alpha
Helix 28
AD1
B
545 560Right-handed alpha
Helix 29
AD2
B
561 565Right-handed 310
Helix 30
AD3
B
573 574Right-handed 310
Helix 31
AD4
B
575 588Right-handed alpha
Helix 32
AD5
B
590 592Right-handed 310
Helix 33
AD6
B
593 615Right-handed alpha
Helix 34
AD7
B
619 633Right-handed alpha
Helix 35
AD8
B
634 641Right-handed 310
Helix 36
AD9
B
642 667Right-handed alpha
Helix 37
AE1
B
671 700Right-handed alpha
Helix 38
AE2
B
704 716Right-handed alpha
Helix 39
AE3
B
717 726Right-handed alpha
Helix 40
AE4
B
727 729Right-handed 310
Helix 41
AE5
B
734 741Right-handed alpha
Helix 42
AE6
B
744 769Right-handed alpha
Helix 43
AE7
B
773 783Right-handed alpha
Helix 44
AE8
B
787 812Right-handed alpha
Helix 45
AE9
B
819 838Right-handed alpha
Helix 46
AF1
B
838 844Right-handed alpha
Helix 47
AF2
B
854 869Right-handed alpha
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There are 2 sheets in PDB entry 7WAT. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
416 417first strand
Strand 2
B
421 422anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
515 516first strand
Strand 2
B
520 521anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il