Analysis of interatomic Contacts of Structural Units in PDB entry:
7WB0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WB0 entry

There are 4 chains in PDB entry 7WB0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 T -2 G 30
C
 C 1 A 27
D
 G 1 A 122
A
 ILE 4VAL 978
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 7WB0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 17Right-handed alpha
Helix 2
AA2
A
38 47Right-handed alpha
Helix 3
AA3
A
60 92Right-handed alpha
Helix 4
AA4
A
92 100Right-handed alpha
Helix 5
AA5
A
196 201Right-handed alpha
Helix 6
AA6
A
210 215Right-handed alpha
Helix 7
AA7
A
221 272Right-handed alpha
Helix 8
AA8
A
287 309Right-handed alpha
Helix 9
AA9
A
589 596Right-handed alpha
Helix 10
AB1
A
647 650Right-handed 310
Helix 11
AB2
A
697 717Right-handed alpha
Helix 12
AB3
A
720 724Right-handed 310
Helix 13
AB4
A
725 750Right-handed alpha
Helix 14
AB5
A
770 774Right-handed 310
Helix 15
AB6
A
776 790Right-handed alpha
Helix 16
AB7
A
793 797Right-handed 310
Helix 17
AB8
A
821 829Right-handed alpha
Helix 18
AB9
A
866 875Right-handed alpha
Helix 19
AC1
A
881 885Right-handed 310
Helix 20
AC2
A
887 898Right-handed alpha
Helix 21
AC3
A
921 936Right-handed alpha
Helix 22
AC4
A
938 951Right-handed alpha
Helix 23
AC5
A
955 973Right-handed alpha
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There are 10 sheets in PDB entry 7WB0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 22first strand
Strand 2
A
643 645anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
502 506first strand
Strand 2
A
609 623anti-parallel
Strand 3
A
628 641anti-parallel
Strand 4
A
29 36anti-parallel
Strand 5
A
586 587anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 115first strand
Strand 2
A
135 145anti-parallel
Strand 3
A
128 130anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 115first strand
Strand 2
A
135 145anti-parallel
Strand 3
A
151 158anti-parallel
Strand 4
A
168 172anti-parallel
Strand 5
A
184 185anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
543 545first strand
Strand 2
A
567 572anti-parallel
Strand 3
A
556 561anti-parallel
Strand 4
A
515 520anti-parallel
Strand 5
A
529 533anti-parallel
Strand 6
A
582 584anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
691 694first strand
Strand 2
A
666 671anti-parallel
Strand 3
A
654 660anti-parallel
Strand 4
A
751 756parallel
Strand 5
A
800 801parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
681 682first strand
Strand 2
A
688 689anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
831 832first strand
Strand 2
A
835 840anti-parallel
Strand 3
A
843 846anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
850 855first strand
Strand 2
A
860 865anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
909 911first strand
Strand 2
A
918 920anti-parallel
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