Analysis of interatomic Contacts of Structural Units in PDB entry:
7WB1

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7WB1 entry

There are 4 chains in PDB entry 7WB1 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	T 1	G 30
C	C 1	A 27
D	G 1	A 121
A	ILE 4	VAL 978

There are 35 helices in PDB entry 7WB1. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	6	17	Right-handed alpha
Helix 2	AA2	A	38	47	Right-handed alpha
Helix 3	AA3	A	60	92	Right-handed alpha
Helix 4	AA4	A	92	100	Right-handed alpha
Helix 5	AA5	A	161	165	Right-handed 310
Helix 6	AA6	A	195	201	Right-handed alpha
Helix 7	AA7	A	210	215	Right-handed alpha
Helix 8	AA8	A	222	271	Right-handed alpha
Helix 9	AA9	A	288	309	Right-handed alpha
Helix 10	AB1	A	343	358	Right-handed alpha
Helix 11	AB2	A	358	368	Right-handed alpha
Helix 12	AB3	A	372	378	Right-handed alpha
Helix 13	AB4	A	379	382	Right-handed 310
Helix 14	AB5	A	384	390	Right-handed alpha
Helix 15	AB6	A	394	411	Right-handed alpha
Helix 16	AB7	A	413	443	Right-handed alpha
Helix 17	AB8	A	446	466	Right-handed alpha
Helix 18	AB9	A	467	469	Right-handed 310
Helix 19	AC1	A	472	493	Right-handed alpha
Helix 20	AC2	A	494	496	Right-handed 310
Helix 21	AC3	A	589	596	Right-handed alpha
Helix 22	AC4	A	697	717	Right-handed alpha
Helix 23	AC5	A	720	724	Right-handed 310
Helix 24	AC6	A	725	750	Right-handed alpha
Helix 25	AC7	A	770	774	Right-handed 310
Helix 26	AC8	A	776	789	Right-handed alpha
Helix 27	AC9	A	793	798	Right-handed alpha
Helix 28	AD1	A	818	829	Right-handed alpha
Helix 29	AD2	A	866	874	Right-handed alpha
Helix 30	AD3	A	875	877	Right-handed 310
Helix 31	AD4	A	881	885	Right-handed 310
Helix 32	AD5	A	886	901	Right-handed alpha
Helix 33	AD6	A	920	937	Right-handed alpha
Helix 34	AD7	A	939	949	Right-handed alpha
Helix 35	AD8	A	954	971	Right-handed alpha

There are 12 sheets in PDB entry 7WB1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	20	22	first strand
Strand 2	A	643	645	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	502	506	first strand
Strand 2	A	609	619	anti-parallel
Strand 3	A	632	641	anti-parallel
Strand 4	A	29	36	anti-parallel
Strand 5	A	586	587	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	114	115	first strand
Strand 2	A	135	141	anti-parallel
Strand 3	A	128	130	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	114	115	first strand
Strand 2	A	135	141	anti-parallel
Strand 3	A	155	158	anti-parallel
Strand 4	A	168	172	anti-parallel
Strand 5	A	184	185	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	143	145	first strand
Strand 2	A	151	153	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	542	545	first strand
Strand 2	A	567	573	anti-parallel
Strand 3	A	556	561	anti-parallel
Strand 4	A	515	520	anti-parallel
Strand 5	A	529	533	anti-parallel
Strand 6	A	582	584	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	622	623	first strand
Strand 2	A	628	629	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	691	694	first strand
Strand 2	A	666	671	anti-parallel
Strand 3	A	654	658	anti-parallel
Strand 4	A	751	756	parallel
Strand 5	A	800	801	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	681	682	first strand
Strand 2	A	688	689	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	830	831	first strand
Strand 2	A	836	840	anti-parallel
Strand 3	A	843	846	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	850	853	first strand
Strand 2	A	862	865	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	910	911	first strand
Strand 2	A	918	919	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7WB1

Analysis of interatomic Contacts of Structural Units in PDB entry:
7WB1