Analysis of interatomic Contacts of Structural Units in PDB entry:
7WBU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WBU entry

There is 1 chain in PDB entry 7WBU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 94VAL 996
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 7WBU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
97 112Right-handed alpha
Helix 2
AA2
A
120 128Right-handed alpha
Helix 3
AA3
A
128 139Right-handed alpha
Helix 4
AA4
A
161 175Right-handed alpha
Helix 5
AA5
A
191 196Right-handed alpha
Helix 6
AA6
A
201 208Right-handed alpha
Helix 7
AA7
A
216 222Right-handed alpha
Helix 8
AA8
A
223 225Right-handed 310
Helix 9
AA9
A
233 237Right-handed 310
Helix 10
AB1
A
256 266Right-handed alpha
Helix 11
AB2
A
280 288Right-handed alpha
Helix 12
AB3
A
303 315Right-handed alpha
Helix 13
AB4
A
318 331Right-handed alpha
Helix 14
AB5
A
331 338Right-handed alpha
Helix 15
AB6
A
340 358Right-handed alpha
Helix 16
AB7
A
367 384Right-handed alpha
Helix 17
AB8
A
388 409Right-handed alpha
Helix 18
AB9
A
415 423Right-handed alpha
Helix 19
AC1
A
425 435Right-handed alpha
Helix 20
AC2
A
449 461Right-handed alpha
Helix 21
AC3
A
462 464Right-handed 310
Helix 22
AC4
A
476 486Right-handed alpha
Helix 23
AC5
A
492 504Right-handed alpha
Helix 24
AC6
A
504 516Right-handed alpha
Helix 25
AC7
A
522 537Right-handed alpha
Helix 26
AC8
A
538 543Right-handed alpha
Helix 27
AC9
A
545 557Right-handed alpha
Helix 28
AD1
A
558 567Right-handed alpha
Helix 29
AD2
A
578 590Right-handed alpha
Helix 30
AD3
A
615 633Right-handed alpha
Helix 31
AD4
A
647 659Right-handed alpha
Helix 32
AD5
A
675 689Right-handed alpha
Helix 33
AD6
A
703 715Right-handed alpha
Helix 34
AD7
A
732 746Right-handed alpha
Helix 35
AD8
A
761 772Right-handed alpha
Helix 36
AD9
A
792 801Right-handed alpha
Helix 37
AE1
A
816 829Right-handed alpha
Helix 38
AE2
A
849 860Right-handed alpha
Helix 39
AE3
A
874 887Right-handed alpha
Helix 40
AE4
A
905 915Right-handed alpha
Helix 41
AE5
A
931 944Right-handed alpha
Helix 42
AE6
A
960 974Right-handed alpha
Helix 43
AE7
A
984 993Right-handed alpha
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There are 3 sheets in PDB entry 7WBU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 190first strand
Strand 2
A
227 232parallel
Strand 3
A
274 279parallel
Strand 4
A
151 155parallel
Strand 5
A
294 298parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
438 440first strand
Strand 2
A
445 447anti-parallel
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There are 15 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
571 576first strand
Strand 2
A
597 602parallel
Strand 3
A
638 642parallel
Strand 4
A
667 671parallel
Strand 5
A
694 696parallel
Strand 6
A
723 725parallel
Strand 7
A
751 753parallel
Strand 8
A
780 782parallel
Strand 9
A
808 810parallel
Strand 10
A
837 839parallel
Strand 11
A
865 867parallel
Strand 12
A
894 896parallel
Strand 13
A
922 924parallel
Strand 14
A
951 953parallel
Strand 15
A
978 980parallel
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