Analysis of interatomic Contacts of Structural Units in PDB entry:
7WEK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WEK entry

There are 4 chains in PDB entry 7WEK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 6ALA 278
B
 GLU 5THR 276
C
 LYS 2GLU 17
D
 LYS 2ALA 16
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 7WEK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 25Right-handed alpha
Helix 2
AA2
A
27 39Right-handed alpha
Helix 3
AA3
A
46 58Right-handed alpha
Helix 4
AA4
A
60 69Right-handed alpha
Helix 5
AA5
A
70 72Right-handed 310
Helix 6
AA6
A
78 99Right-handed alpha
Helix 7
AA7
A
112 125Right-handed alpha
Helix 8
AA8
A
126 128Right-handed 310
Helix 9
AA9
A
130 139Right-handed alpha
Helix 10
AB1
A
140 143Right-handed 310
Helix 11
AB2
A
156 173Right-handed alpha
Helix 12
AB3
A
192 216Right-handed alpha
Helix 13
AB4
A
221 228Right-handed alpha
Helix 14
AB5
A
242 250Right-handed alpha
Helix 15
AB6
B
11 25Right-handed alpha
Helix 16
AB7
B
27 39Right-handed alpha
Helix 17
AB8
B
46 59Right-handed alpha
Helix 18
AB9
B
60 69Right-handed alpha
Helix 19
AC1
B
70 72Right-handed 310
Helix 20
AC2
B
78 102Right-handed alpha
Helix 21
AC3
B
112 125Right-handed alpha
Helix 22
AC4
B
130 141Right-handed alpha
Helix 23
AC5
B
145 149Right-handed 310
Helix 24
AC6
B
156 173Right-handed alpha
Helix 25
AC7
B
192 216Right-handed alpha
Helix 26
AC8
B
221 228Right-handed alpha
Helix 27
AC9
B
242 250Right-handed alpha
Helix 28
AD1
B
254 258Right-handed 310
Helix 29
AD2
C
5 15Right-handed alpha
Helix 30
AD3
D
6 15Right-handed alpha
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There are 3 sheets in PDB entry 7WEK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 10first strand
Strand 2
B
267 270parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 270first strand
Strand 2
B
6 10parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
260 261first strand
Strand 2
C
3 4anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il