Analysis of interatomic Contacts of Structural Units in PDB entry:
7WEX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WEX entry

There is 1 chain in PDB entry 7WEX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2TYR 388
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 21 helices in PDB entry 7WEX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 22Right-handed alpha
Helix 2
AA2
A
40 49Right-handed alpha
Helix 3
AA3
A
56 60Right-handed 310
Helix 4
AA4
A
71 76Right-handed 310
Helix 5
AA5
A
77 81Right-handed 310
Helix 6
AA6
A
84 95Right-handed alpha
Helix 7
AA7
A
98 104Right-handed alpha
Helix 8
AA8
A
105 119Right-handed alpha
Helix 9
AA9
A
128 132Right-handed alpha
Helix 10
AB1
A
134 146Right-handed alpha
Helix 11
AB2
A
148 150Right-handed 310
Helix 12
AB3
A
151 160Right-handed alpha
Helix 13
AB4
A
161 163Right-handed 310
Helix 14
AB5
A
170 194Right-handed alpha
Helix 15
AB6
A
198 207Right-handed alpha
Helix 16
AB7
A
214 229Right-handed alpha
Helix 17
AB8
A
230 246Right-handed alpha
Helix 18
AB9
A
247 257Right-handed alpha
Helix 19
AC1
A
260 273Right-handed alpha
Helix 20
AC2
A
303 309Right-handed alpha
Helix 21
AC3
A
341 360Right-handed alpha
Back to top of page

There are 5 sheets in PDB entry 7WEX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 28first strand
Strand 2
A
34 38anti-parallel
Strand 3
A
300 302parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 54first strand
Strand 2
A
282 283anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 127first strand
Strand 2
A
385 388anti-parallel
Strand 3
A
364 365anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
287 289first strand
Strand 2
A
292 294anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
371 372first strand
Strand 2
A
381 383anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il