Analysis of interatomic Contacts of Structural Units in PDB entry:
7WF3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7WF3 entry

There are 12 chains in PDB entry 7WF3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	GLU 208	GLY 493
C	ARG 34	SER 361
D	GLU 208	GLY 493
F	GLU 208	GLY 493
G	ARG 34	SER 361
H	GLU 208	GLY 493
I	ARG 34	SER 361
J	GLN 99	LEU 204
M	ARG 34	SER 361
N	GLN 99	LEU 204
O	GLN 99	LEU 204
P	GLN 99	LEU 204

There are136 helices in PDB entry 7WF3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	217	226	Right-handed alpha
Helix 2	AA2	B	230	254	Right-handed alpha
Helix 3	AA3	B	294	316	Right-handed alpha
Helix 4	AA4	B	319	326	Right-handed alpha
Helix 5	AA5	B	327	352	Right-handed alpha
Helix 6	AA6	B	360	370	Right-handed alpha
Helix 7	AA7	B	371	380	Right-handed 310
Helix 8	AA8	B	381	393	Right-handed alpha
Helix 9	AA9	B	394	419	Right-handed alpha
Helix 10	AB1	B	430	440	Right-handed alpha
Helix 11	AB2	B	454	474	Right-handed alpha
Helix 12	AB3	B	475	492	Right-handed alpha
Helix 13	AB4	C	65	79	Right-handed alpha
Helix 14	AB5	C	89	92	Right-handed 310
Helix 15	AB6	C	93	107	Right-handed alpha
Helix 16	AB7	C	109	113	Right-handed 310
Helix 17	AB8	C	125	129	Right-handed 310
Helix 18	AB9	C	132	148	Right-handed alpha
Helix 19	AC1	C	165	179	Right-handed alpha
Helix 20	AC2	C	191	205	Right-handed alpha
Helix 21	AC3	C	222	228	Right-handed alpha
Helix 22	AC4	C	228	236	Right-handed alpha
Helix 23	AC5	C	246	250	Right-handed 310
Helix 24	AC6	C	270	278	Right-handed alpha
Helix 25	AC7	C	279	300	Right-handed alpha
Helix 26	AC8	C	302	311	Right-handed alpha
Helix 27	AC9	C	326	335	Right-handed alpha
Helix 28	AD1	C	339	343	Right-handed 310
Helix 29	AD2	C	344	356	Right-handed alpha
Helix 30	AD3	D	217	226	Right-handed alpha
Helix 31	AD4	D	230	254	Right-handed alpha
Helix 32	AD5	D	294	316	Right-handed alpha
Helix 33	AD6	D	319	326	Right-handed alpha
Helix 34	AD7	D	327	352	Right-handed alpha
Helix 35	AD8	D	360	370	Right-handed alpha
Helix 36	AD9	D	371	380	Right-handed 310
Helix 37	AE1	D	381	393	Right-handed alpha
Helix 38	AE2	D	394	419	Right-handed alpha
Helix 39	AE3	D	430	440	Right-handed alpha
Helix 40	AE4	D	454	474	Right-handed alpha
Helix 41	AE5	D	475	492	Right-handed alpha
Helix 42	AE6	F	217	226	Right-handed alpha
Helix 43	AE7	F	230	254	Right-handed alpha
Helix 44	AE8	F	294	316	Right-handed alpha
Helix 45	AE9	F	319	326	Right-handed alpha
Helix 46	AF1	F	327	352	Right-handed alpha
Helix 47	AF2	F	360	370	Right-handed alpha
Helix 48	AF3	F	371	380	Right-handed 310
Helix 49	AF4	F	381	393	Right-handed alpha
Helix 50	AF5	F	394	419	Right-handed alpha
Helix 51	AF6	F	430	440	Right-handed alpha
Helix 52	AF7	F	454	474	Right-handed alpha
Helix 53	AF8	F	475	492	Right-handed alpha
Helix 54	AF9	G	65	79	Right-handed alpha
Helix 55	AG1	G	89	92	Right-handed 310
Helix 56	AG2	G	93	107	Right-handed alpha
Helix 57	AG3	G	109	113	Right-handed 310
Helix 58	AG4	G	125	129	Right-handed 310
Helix 59	AG5	G	132	148	Right-handed alpha
Helix 60	AG6	G	165	179	Right-handed alpha
Helix 61	AG7	G	191	205	Right-handed alpha
Helix 62	AG8	G	222	228	Right-handed alpha
Helix 63	AG9	G	228	236	Right-handed alpha
Helix 64	AH1	G	246	250	Right-handed 310
Helix 65	AH2	G	270	278	Right-handed alpha
Helix 66	AH3	G	279	300	Right-handed alpha
Helix 67	AH4	G	302	311	Right-handed alpha
Helix 68	AH5	G	326	335	Right-handed alpha
Helix 69	AH6	G	339	343	Right-handed 310
Helix 70	AH7	G	344	356	Right-handed alpha
Helix 71	AH8	H	217	226	Right-handed alpha
Helix 72	AH9	H	230	254	Right-handed alpha
Helix 73	AI1	H	294	316	Right-handed alpha
Helix 74	AI2	H	319	326	Right-handed alpha
Helix 75	AI3	H	327	352	Right-handed alpha
Helix 76	AI4	H	360	370	Right-handed alpha
Helix 77	AI5	H	371	380	Right-handed 310
Helix 78	AI6	H	381	393	Right-handed alpha
Helix 79	AI7	H	394	419	Right-handed alpha
Helix 80	AI8	H	430	440	Right-handed alpha
Helix 81	AI9	H	454	474	Right-handed alpha
Helix 82	AJ1	H	475	492	Right-handed alpha
Helix 83	AJ2	I	65	79	Right-handed alpha
Helix 84	AJ3	I	89	92	Right-handed 310
Helix 85	AJ4	I	93	107	Right-handed alpha
Helix 86	AJ5	I	109	113	Right-handed 310
Helix 87	AJ6	I	125	129	Right-handed 310
Helix 88	AJ7	I	132	148	Right-handed alpha
Helix 89	AJ8	I	165	179	Right-handed alpha
Helix 90	AJ9	I	191	205	Right-handed alpha
Helix 91	AK1	I	222	228	Right-handed alpha
Helix 92	AK2	I	228	236	Right-handed alpha
Helix 93	AK3	I	246	250	Right-handed 310
Helix 94	AK4	I	270	278	Right-handed alpha
Helix 95	AK5	I	279	300	Right-handed alpha
Helix 96	AK6	I	302	311	Right-handed alpha
Helix 97	AK7	I	326	335	Right-handed alpha
Helix 98	AK8	I	339	343	Right-handed 310
Helix 99	AK9	I	344	356	Right-handed alpha
Helix 100	AL1	J	119	123	Right-handed alpha
Helix 101	AL2	J	135	138	Right-handed 310
Helix 102	AL3	J	155	165	Right-handed alpha
Helix 103	AL4	J	176	188	Right-handed alpha
Helix 104	AL5	J	191	201	Right-handed alpha
Helix 105	AL6	M	65	79	Right-handed alpha
Helix 106	AL7	M	89	92	Right-handed 310
Helix 107	AL8	M	93	107	Right-handed alpha
Helix 108	AL9	M	109	113	Right-handed 310
Helix 109	AM1	M	125	129	Right-handed 310
Helix 110	AM2	M	132	148	Right-handed alpha
Helix 111	AM3	M	165	179	Right-handed alpha
Helix 112	AM4	M	191	205	Right-handed alpha
Helix 113	AM5	M	222	228	Right-handed alpha
Helix 114	AM6	M	228	236	Right-handed alpha
Helix 115	AM7	M	246	250	Right-handed 310
Helix 116	AM8	M	270	278	Right-handed alpha
Helix 117	AM9	M	279	300	Right-handed alpha
Helix 118	AN1	M	302	311	Right-handed alpha
Helix 119	AN2	M	326	335	Right-handed alpha
Helix 120	AN3	M	339	343	Right-handed 310
Helix 121	AN4	M	344	356	Right-handed alpha
Helix 122	AN5	N	119	123	Right-handed alpha
Helix 123	AN6	N	135	138	Right-handed 310
Helix 124	AN7	N	155	165	Right-handed alpha
Helix 125	AN8	N	176	188	Right-handed alpha
Helix 126	AN9	N	191	201	Right-handed alpha
Helix 127	AO1	O	119	123	Right-handed alpha
Helix 128	AO2	O	135	138	Right-handed 310
Helix 129	AO3	O	155	165	Right-handed alpha
Helix 130	AO4	O	176	188	Right-handed alpha
Helix 131	AO5	O	191	201	Right-handed alpha
Helix 132	AO6	P	119	123	Right-handed alpha
Helix 133	AO7	P	135	138	Right-handed 310
Helix 134	AO8	P	155	165	Right-handed alpha
Helix 135	AO9	P	176	188	Right-handed alpha
Helix 136	AP1	P	191	201	Right-handed alpha

There are 12 sheets in PDB entry 7WF3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	39	41	first strand
Strand 2	C	48	50	anti-parallel

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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	52	55	first strand
Strand 2	C	83	85	parallel
Strand 3	C	114	119	parallel
Strand 4	C	154	157	parallel
Strand 5	C	184	188	parallel
Strand 6	C	212	214	parallel
Strand 7	C	239	242	parallel
Strand 8	C	317	322	parallel
Strand 9	C	52	55	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	39	41	first strand
Strand 2	G	48	50	anti-parallel

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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	52	55	first strand
Strand 2	G	83	85	parallel
Strand 3	G	114	119	parallel
Strand 4	G	154	157	parallel
Strand 5	G	184	188	parallel
Strand 6	G	212	214	parallel
Strand 7	G	239	242	parallel
Strand 8	G	317	322	parallel
Strand 9	G	52	55	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	39	41	first strand
Strand 2	I	48	50	anti-parallel

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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	52	55	first strand
Strand 2	I	83	85	parallel
Strand 3	I	114	119	parallel
Strand 4	I	154	157	parallel
Strand 5	I	184	188	parallel
Strand 6	I	212	214	parallel
Strand 7	I	239	242	parallel
Strand 8	I	317	322	parallel
Strand 9	I	52	55	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	113	118	first strand
Strand 2	J	105	110	anti-parallel
Strand 3	J	146	149	parallel
Strand 4	J	140	141	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	39	41	first strand
Strand 2	M	48	50	anti-parallel

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There are 9 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	52	55	first strand
Strand 2	M	83	85	parallel
Strand 3	M	114	119	parallel
Strand 4	M	154	157	parallel
Strand 5	M	184	188	parallel
Strand 6	M	212	214	parallel
Strand 7	M	239	242	parallel
Strand 8	M	317	322	parallel
Strand 9	M	52	55	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	113	118	first strand
Strand 2	N	105	110	anti-parallel
Strand 3	N	146	149	parallel
Strand 4	N	140	141	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	113	118	first strand
Strand 2	O	105	110	anti-parallel
Strand 3	O	146	149	parallel
Strand 4	O	140	141	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	113	118	first strand
Strand 2	P	105	110	anti-parallel
Strand 3	P	146	149	parallel
Strand 4	P	140	141	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7WF3

Analysis of interatomic Contacts of Structural Units in PDB entry:
7WF3