Analysis of interatomic Contacts of Structural Units in PDB entry:
7WF4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7WF4 entry

There are 12 chains in PDB entry 7WF4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	GLU 208	GLU 490
G	ARG 34	SER 361
I	ARG 34	SER 361
J	GLN 99	LEU 204
M	ARG 34	SER 361
N	GLN 99	LEU 204
O	GLN 99	LEU 204
P	GLN 99	LEU 204
o	ARG 34	SER 361
B	GLU 208	GLU 490
F	GLU 208	GLU 490
H	GLU 208	GLU 490

There are128 helices in PDB entry 7WF4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	216	226	Right-handed alpha
Helix 2	AA2	D	230	254	Right-handed alpha
Helix 3	AA3	D	293	316	Right-handed alpha
Helix 4	AA4	D	319	326	Right-handed alpha
Helix 5	AA5	D	327	353	Right-handed alpha
Helix 6	AA6	D	359	370	Right-handed alpha
Helix 7	AA7	D	371	380	Right-handed 310
Helix 8	AA8	D	381	394	Right-handed alpha
Helix 9	AA9	D	394	419	Right-handed alpha
Helix 10	AB1	D	430	443	Right-handed alpha
Helix 11	AB2	D	454	473	Right-handed alpha
Helix 12	AB3	D	475	489	Right-handed alpha
Helix 13	AB4	G	65	78	Right-handed alpha
Helix 14	AB5	G	89	92	Right-handed 310
Helix 15	AB6	G	93	107	Right-handed alpha
Helix 16	AB7	G	109	113	Right-handed 310
Helix 17	AB8	G	125	129	Right-handed 310
Helix 18	AB9	G	132	148	Right-handed alpha
Helix 19	AC1	G	165	179	Right-handed alpha
Helix 20	AC2	G	191	205	Right-handed alpha
Helix 21	AC3	G	222	228	Right-handed alpha
Helix 22	AC4	G	228	236	Right-handed alpha
Helix 23	AC5	G	270	278	Right-handed alpha
Helix 24	AC6	G	280	300	Right-handed alpha
Helix 25	AC7	G	302	311	Right-handed alpha
Helix 26	AC8	G	326	335	Right-handed alpha
Helix 27	AC9	G	344	356	Right-handed alpha
Helix 28	AD1	I	65	78	Right-handed alpha
Helix 29	AD2	I	89	92	Right-handed 310
Helix 30	AD3	I	93	107	Right-handed alpha
Helix 31	AD4	I	109	113	Right-handed 310
Helix 32	AD5	I	125	129	Right-handed 310
Helix 33	AD6	I	132	148	Right-handed alpha
Helix 34	AD7	I	165	179	Right-handed alpha
Helix 35	AD8	I	191	205	Right-handed alpha
Helix 36	AD9	I	222	228	Right-handed alpha
Helix 37	AE1	I	228	236	Right-handed alpha
Helix 38	AE2	I	270	278	Right-handed alpha
Helix 39	AE3	I	280	300	Right-handed alpha
Helix 40	AE4	I	302	311	Right-handed alpha
Helix 41	AE5	I	326	335	Right-handed alpha
Helix 42	AE6	I	344	356	Right-handed alpha
Helix 43	AE7	J	119	123	Right-handed alpha
Helix 44	AE8	J	136	138	Right-handed 310
Helix 45	AE9	J	155	166	Right-handed alpha
Helix 46	AF1	J	176	188	Right-handed alpha
Helix 47	AF2	J	190	201	Right-handed alpha
Helix 48	AF3	M	65	78	Right-handed alpha
Helix 49	AF4	M	89	92	Right-handed 310
Helix 50	AF5	M	93	107	Right-handed alpha
Helix 51	AF6	M	109	113	Right-handed 310
Helix 52	AF7	M	125	129	Right-handed 310
Helix 53	AF8	M	132	148	Right-handed alpha
Helix 54	AF9	M	165	179	Right-handed alpha
Helix 55	AG1	M	191	205	Right-handed alpha
Helix 56	AG2	M	222	228	Right-handed alpha
Helix 57	AG3	M	228	236	Right-handed alpha
Helix 58	AG4	M	270	278	Right-handed alpha
Helix 59	AG5	M	280	300	Right-handed alpha
Helix 60	AG6	M	302	311	Right-handed alpha
Helix 61	AG7	M	326	335	Right-handed alpha
Helix 62	AG8	M	344	356	Right-handed alpha
Helix 63	AG9	N	119	123	Right-handed alpha
Helix 64	AH1	N	136	138	Right-handed 310
Helix 65	AH2	N	155	166	Right-handed alpha
Helix 66	AH3	N	176	188	Right-handed alpha
Helix 67	AH4	N	190	201	Right-handed alpha
Helix 68	AH5	O	119	123	Right-handed alpha
Helix 69	AH6	O	136	138	Right-handed 310
Helix 70	AH7	O	155	166	Right-handed alpha
Helix 71	AH8	O	176	188	Right-handed alpha
Helix 72	AH9	O	190	201	Right-handed alpha
Helix 73	AI1	P	119	123	Right-handed alpha
Helix 74	AI2	P	136	138	Right-handed 310
Helix 75	AI3	P	155	166	Right-handed alpha
Helix 76	AI4	P	176	188	Right-handed alpha
Helix 77	AI5	P	190	201	Right-handed alpha
Helix 78	AI6	o	65	78	Right-handed alpha
Helix 79	AI7	o	89	92	Right-handed 310
Helix 80	AI8	o	93	107	Right-handed alpha
Helix 81	AI9	o	109	113	Right-handed 310
Helix 82	AJ1	o	125	129	Right-handed 310
Helix 83	AJ2	o	132	148	Right-handed alpha
Helix 84	AJ3	o	165	179	Right-handed alpha
Helix 85	AJ4	o	191	205	Right-handed alpha
Helix 86	AJ5	o	222	228	Right-handed alpha
Helix 87	AJ6	o	228	236	Right-handed alpha
Helix 88	AJ7	o	270	278	Right-handed alpha
Helix 89	AJ8	o	280	300	Right-handed alpha
Helix 90	AJ9	o	302	311	Right-handed alpha
Helix 91	AK1	o	326	335	Right-handed alpha
Helix 92	AK2	o	344	356	Right-handed alpha
Helix 93	AK3	B	216	226	Right-handed alpha
Helix 94	AK4	B	230	254	Right-handed alpha
Helix 95	AK5	B	293	316	Right-handed alpha
Helix 96	AK6	B	319	326	Right-handed alpha
Helix 97	AK7	B	327	353	Right-handed alpha
Helix 98	AK8	B	359	370	Right-handed alpha
Helix 99	AK9	B	371	380	Right-handed 310
Helix 100	AL1	B	381	394	Right-handed alpha
Helix 101	AL2	B	394	419	Right-handed alpha
Helix 102	AL3	B	430	443	Right-handed alpha
Helix 103	AL4	B	454	473	Right-handed alpha
Helix 104	AL5	B	475	489	Right-handed alpha
Helix 105	AL6	F	216	226	Right-handed alpha
Helix 106	AL7	F	230	254	Right-handed alpha
Helix 107	AL8	F	293	316	Right-handed alpha
Helix 108	AL9	F	319	326	Right-handed alpha
Helix 109	AM1	F	327	353	Right-handed alpha
Helix 110	AM2	F	359	370	Right-handed alpha
Helix 111	AM3	F	371	380	Right-handed 310
Helix 112	AM4	F	381	394	Right-handed alpha
Helix 113	AM5	F	394	419	Right-handed alpha
Helix 114	AM6	F	430	443	Right-handed alpha
Helix 115	AM7	F	454	473	Right-handed alpha
Helix 116	AM8	F	475	489	Right-handed alpha
Helix 117	AM9	H	216	226	Right-handed alpha
Helix 118	AN1	H	230	254	Right-handed alpha
Helix 119	AN2	H	293	316	Right-handed alpha
Helix 120	AN3	H	319	326	Right-handed alpha
Helix 121	AN4	H	327	353	Right-handed alpha
Helix 122	AN5	H	359	370	Right-handed alpha
Helix 123	AN6	H	371	380	Right-handed 310
Helix 124	AN7	H	381	394	Right-handed alpha
Helix 125	AN8	H	394	419	Right-handed alpha
Helix 126	AN9	H	430	443	Right-handed alpha
Helix 127	AO1	H	454	473	Right-handed alpha
Helix 128	AO2	H	475	489	Right-handed alpha

There are 12 sheets in PDB entry 7WF4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	39	41	first strand
Strand 2	G	48	50	anti-parallel

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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	52	55	first strand
Strand 2	G	83	85	parallel
Strand 3	G	114	119	parallel
Strand 4	G	152	157	parallel
Strand 5	G	182	188	parallel
Strand 6	G	212	216	parallel
Strand 7	G	239	243	parallel
Strand 8	G	317	322	parallel
Strand 9	G	52	55	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	39	41	first strand
Strand 2	I	48	50	anti-parallel

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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	52	55	first strand
Strand 2	I	83	85	parallel
Strand 3	I	114	119	parallel
Strand 4	I	152	157	parallel
Strand 5	I	182	188	parallel
Strand 6	I	212	216	parallel
Strand 7	I	239	243	parallel
Strand 8	I	317	322	parallel
Strand 9	I	52	55	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	113	118	first strand
Strand 2	J	105	110	anti-parallel
Strand 3	J	146	149	parallel
Strand 4	J	140	141	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	39	41	first strand
Strand 2	M	48	50	anti-parallel

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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	52	55	first strand
Strand 2	M	83	85	parallel
Strand 3	M	114	119	parallel
Strand 4	M	152	157	parallel
Strand 5	M	182	188	parallel
Strand 6	M	212	216	parallel
Strand 7	M	239	243	parallel
Strand 8	M	317	322	parallel
Strand 9	M	52	55	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	113	118	first strand
Strand 2	N	105	110	anti-parallel
Strand 3	N	146	149	parallel
Strand 4	N	140	141	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	113	118	first strand
Strand 2	O	105	110	anti-parallel
Strand 3	O	146	149	parallel
Strand 4	O	140	141	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	113	118	first strand
Strand 2	P	105	110	anti-parallel
Strand 3	P	146	149	parallel
Strand 4	P	140	141	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	o	39	41	first strand
Strand 2	o	48	50	anti-parallel

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There are 9 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	o	52	55	first strand
Strand 2	o	83	85	parallel
Strand 3	o	114	119	parallel
Strand 4	o	152	157	parallel
Strand 5	o	182	188	parallel
Strand 6	o	212	216	parallel
Strand 7	o	239	243	parallel
Strand 8	o	317	322	parallel
Strand 9	o	52	55	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7WF4

Analysis of interatomic Contacts of Structural Units in PDB entry:
7WF4