Analysis of interatomic Contacts of Structural Units in PDB entry:
7WFC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WFC entry

There are 2 chains in PDB entry 7WFC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3LEU 311
B
 GLY -4GLY 76
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 7WFC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 31Right-handed alpha
Helix 2
AA2
A
46 50Right-handed 310
Helix 3
AA3
A
61 72Right-handed alpha
Helix 4
AA4
A
75 89Right-handed alpha
Helix 5
AA5
A
108 119Right-handed alpha
Helix 6
AA6
A
127 139Right-handed alpha
Helix 7
AA7
A
142 153Right-handed alpha
Helix 8
AA8
A
162 174Right-handed alpha
Helix 9
AA9
A
198 202Right-handed alpha
Helix 10
AB1
A
209 216Right-handed alpha
Helix 11
AB2
B
22 35Right-handed alpha
Helix 12
AB3
B
37 39Right-handed 310
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There are 7 sheets in PDB entry 7WFC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 20first strand
Strand 2
A
4 9anti-parallel
Strand 3
A
53 55parallel
Strand 4
A
34 35anti-parallel
Strand 5
A
38 39anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 96first strand
Strand 2
A
99 102anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 197first strand
Strand 2
A
180 186anti-parallel
Strand 3
A
226 234anti-parallel
Strand 4
A
217 219anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 197first strand
Strand 2
A
180 186anti-parallel
Strand 3
A
226 234anti-parallel
Strand 4
A
304 306anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 205first strand
Strand 2
A
238 241parallel
Strand 3
A
293 299anti-parallel
Strand 4
A
255 261anti-parallel
Strand 5
A
264 271anti-parallel
Strand 6
A
277 280anti-parallel
Strand 7
A
283 286anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 205first strand
Strand 2
A
238 241parallel
Strand 3
A
293 299anti-parallel
Strand 4
A
255 261anti-parallel
Strand 5
A
264 271anti-parallel
Strand 6
B
74 75parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 17first strand
Strand 2
B
1 6anti-parallel
Strand 3
B
66 71parallel
Strand 4
B
41 45anti-parallel
Strand 5
B
48 49anti-parallel
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