Analysis of interatomic Contacts of Structural Units in PDB entry:
7WFF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7WFF entry

There are 17 chains in PDB entry 7WFF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TYR 24	SER 359
B	PHE 27	PHE 512
C	LEU 3	TRP 119
D	ASP 9	TYR 505
E	MET 1	LYS 89
F	MET 1	ILE 715
G	GLY 5	GLN 176
a	VAL 115	GLU 455
b	ILE 28	LEU 348
c	PRO 67	ILE 194
d	ALA 65	HIS 157
e	GLY 51	TRP 200
f	PRO 85	GLN 237
g	PHE 74	PHE 188
h	ASP 76	ALA 220
i	ALA 73	ARG 217
j	GLN 81	SER 253

There are161 helices in PDB entry 7WFF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	26	60	Right-handed alpha
Helix 2	AA2	A	70	84	Right-handed alpha
Helix 3	AA3	A	94	111	Right-handed alpha
Helix 4	AA4	A	112	114	Right-handed 310
Helix 5	AA5	A	129	140	Right-handed alpha
Helix 6	AA6	A	140	152	Right-handed alpha
Helix 7	AA7	A	154	171	Right-handed alpha
Helix 8	AA8	A	171	187	Right-handed alpha
Helix 9	AA9	A	190	199	Right-handed alpha
Helix 10	AB1	A	211	225	Right-handed alpha
Helix 11	AB2	A	250	275	Right-handed alpha
Helix 12	AB3	A	297	325	Right-handed alpha
Helix 13	AB4	A	330	338	Right-handed alpha
Helix 14	AB5	A	340	356	Right-handed alpha
Helix 15	AB6	B	29	31	Right-handed 310
Helix 16	AB7	B	32	49	Right-handed alpha
Helix 17	AB8	B	57	78	Right-handed alpha
Helix 18	AB9	B	94	112	Right-handed alpha
Helix 19	AC1	B	117	122	Right-handed alpha
Helix 20	AC2	B	125	146	Right-handed alpha
Helix 21	AC3	B	150	168	Right-handed alpha
Helix 22	AC4	B	174	205	Right-handed alpha
Helix 23	AC5	B	210	221	Right-handed alpha
Helix 24	AC6	B	226	245	Right-handed alpha
Helix 25	AC7	B	246	250	Right-handed 310
Helix 26	AC8	B	251	260	Right-handed alpha
Helix 27	AC9	B	261	286	Right-handed alpha
Helix 28	AD1	B	291	314	Right-handed alpha
Helix 29	AD2	B	315	317	Right-handed 310
Helix 30	AD3	B	320	341	Right-handed alpha
Helix 31	AD4	B	348	375	Right-handed alpha
Helix 32	AD5	B	380	385	Right-handed 310
Helix 33	AD6	B	386	391	Right-handed alpha
Helix 34	AD7	B	391	407	Right-handed alpha
Helix 35	AD8	B	411	428	Right-handed alpha
Helix 36	AD9	B	429	454	Right-handed alpha
Helix 37	AE1	B	479	497	Right-handed alpha
Helix 38	AE2	B	498	507	Right-handed alpha
Helix 39	AE3	B	508	512	Right-handed 310
Helix 40	AE4	C	7	31	Right-handed alpha
Helix 41	AE5	C	60	85	Right-handed alpha
Helix 42	AE6	C	90	114	Right-handed alpha
Helix 43	AE7	D	11	18	Right-handed alpha
Helix 44	AE8	D	18	25	Right-handed alpha
Helix 45	AE9	D	34	59	Right-handed alpha
Helix 46	AF1	D	92	110	Right-handed alpha
Helix 47	AF2	D	116	137	Right-handed alpha
Helix 48	AF3	D	139	149	Right-handed alpha
Helix 49	AF4	D	151	160	Right-handed alpha
Helix 50	AF5	D	165	194	Right-handed alpha
Helix 51	AF6	D	202	207	Right-handed alpha
Helix 52	AF7	D	212	231	Right-handed alpha
Helix 53	AF8	D	238	244	Right-handed alpha
Helix 54	AF9	D	248	256	Right-handed alpha
Helix 55	AG1	D	265	270	Right-handed alpha
Helix 56	AG2	D	275	304	Right-handed alpha
Helix 57	AG3	D	307	328	Right-handed alpha
Helix 58	AG4	D	330	363	Right-handed alpha
Helix 59	AG5	D	377	392	Right-handed alpha
Helix 60	AG6	D	397	412	Right-handed alpha
Helix 61	AG7	D	417	430	Right-handed alpha
Helix 62	AG8	D	430	447	Right-handed alpha
Helix 63	AG9	D	464	484	Right-handed alpha
Helix 64	AH1	D	485	488	Right-handed 310
Helix 65	AH2	D	492	505	Right-handed alpha
Helix 66	AH3	E	4	23	Right-handed alpha
Helix 67	AH4	E	26	53	Right-handed alpha
Helix 68	AH5	E	57	88	Right-handed alpha
Helix 69	AH6	F	16	24	Right-handed alpha
Helix 70	AH7	F	29	36	Right-handed alpha
Helix 71	AH8	F	38	65	Right-handed alpha
Helix 72	AH9	F	90	115	Right-handed alpha
Helix 73	AI1	F	121	140	Right-handed alpha
Helix 74	AI2	F	143	163	Right-handed alpha
Helix 75	AI3	F	168	200	Right-handed alpha
Helix 76	AI4	F	204	212	Right-handed alpha
Helix 77	AI5	F	214	218	Right-handed 310
Helix 78	AI6	F	222	241	Right-handed alpha
Helix 79	AI7	F	252	256	Right-handed 310
Helix 80	AI8	F	257	264	Right-handed alpha
Helix 81	AI9	F	267	281	Right-handed alpha
Helix 82	AJ1	F	282	284	Right-handed 310
Helix 83	AJ2	F	289	302	Right-handed alpha
Helix 84	AJ3	F	314	336	Right-handed alpha
Helix 85	AJ4	F	338	372	Right-handed alpha
Helix 86	AJ5	F	374	379	Right-handed alpha
Helix 87	AJ6	F	391	407	Right-handed alpha
Helix 88	AJ7	F	414	425	Right-handed alpha
Helix 89	AJ8	F	429	454	Right-handed alpha
Helix 90	AJ9	F	466	474	Right-handed alpha
Helix 91	AK1	F	544	561	Right-handed alpha
Helix 92	AK2	F	562	564	Right-handed 310
Helix 93	AK3	F	571	576	Right-handed alpha
Helix 94	AK4	F	602	625	Right-handed alpha
Helix 95	AK5	F	633	644	Right-handed alpha
Helix 96	AK6	F	649	664	Right-handed alpha
Helix 97	AK7	F	666	675	Right-handed alpha
Helix 98	AK8	F	675	694	Right-handed alpha
Helix 99	AK9	F	694	714	Right-handed alpha
Helix 100	AL1	G	6	28	Right-handed alpha
Helix 101	AL2	G	31	53	Right-handed alpha
Helix 102	AL3	G	55	67	Right-handed alpha
Helix 103	AL4	G	69	80	Right-handed alpha
Helix 104	AL5	G	99	116	Right-handed alpha
Helix 105	AL6	G	119	125	Right-handed alpha
Helix 106	AL7	G	139	150	Right-handed alpha
Helix 107	AL8	G	152	175	Right-handed alpha
Helix 108	AL9	a	125	131	Right-handed alpha
Helix 109	AM1	a	132	143	Right-handed alpha
Helix 110	AM2	a	157	162	Right-handed 310
Helix 111	AM3	a	173	177	Right-handed 310
Helix 112	AM4	a	180	194	Right-handed alpha
Helix 113	AM5	a	208	216	Right-handed alpha
Helix 114	AM6	a	233	237	Right-handed 310
Helix 115	AM7	a	248	253	Right-handed 310
Helix 116	AM8	a	257	264	Right-handed alpha
Helix 117	AM9	a	284	298	Right-handed alpha
Helix 118	AN1	a	315	319	Right-handed 310
Helix 119	AN2	a	331	341	Right-handed alpha
Helix 120	AN3	a	352	354	Right-handed 310
Helix 121	AN4	a	355	363	Right-handed alpha
Helix 122	AN5	a	374	385	Right-handed alpha
Helix 123	AN6	a	393	401	Right-handed alpha
Helix 124	AN7	a	402	404	Right-handed 310
Helix 125	AN8	a	412	420	Right-handed alpha
Helix 126	AN9	a	422	427	Right-handed alpha
Helix 127	AO1	a	444	454	Right-handed alpha
Helix 128	AO2	b	29	38	Right-handed alpha
Helix 129	AO3	b	261	266	Right-handed alpha
Helix 130	AO4	b	304	311	Right-handed 310
Helix 131	AO5	c	97	105	Right-handed alpha
Helix 132	AO6	c	111	119	Right-handed 310
Helix 133	AO7	c	146	151	Right-handed alpha
Helix 134	AO8	d	87	109	Right-handed alpha
Helix 135	AO9	d	110	112	Right-handed 310
Helix 136	AP1	d	115	119	Right-handed 310
Helix 137	AP2	d	121	126	Right-handed alpha
Helix 138	AP3	d	132	155	Right-handed alpha
Helix 139	AP4	e	101	109	Right-handed alpha
Helix 140	AP5	e	114	129	Right-handed alpha
Helix 141	AP6	e	137	155	Right-handed alpha
Helix 142	AP7	e	161	165	Right-handed 310
Helix 143	AP8	e	166	170	Right-handed 310
Helix 144	AP9	f	145	155	Right-handed alpha
Helix 145	AQ1	f	217	219	Right-handed 310
Helix 146	AQ2	f	222	231	Right-handed alpha
Helix 147	AQ3	g	75	79	Right-handed alpha
Helix 148	AQ4	g	85	102	Right-handed alpha
Helix 149	AQ5	g	103	108	Right-handed alpha
Helix 150	AQ6	g	111	134	Right-handed alpha
Helix 151	AQ7	g	135	137	Right-handed 310
Helix 152	AQ8	g	138	165	Right-handed alpha
Helix 153	AQ9	g	167	183	Right-handed alpha
Helix 154	AR1	h	115	132	Right-handed alpha
Helix 155	AR2	h	133	135	Right-handed 310
Helix 156	AR3	h	141	166	Right-handed alpha
Helix 157	AR4	h	171	195	Right-handed alpha
Helix 158	AR5	h	197	220	Right-handed alpha
Helix 159	AR6	i	149	157	Right-handed alpha
Helix 160	AR7	j	114	124	Right-handed alpha
Helix 161	AR8	j	220	229	Right-handed alpha

There are 15 sheets in PDB entry 7WFF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	69	72	first strand
Strand 2	D	86	88	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	69	70	first strand
Strand 2	F	88	89	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	117	118	first strand
Strand 2	a	147	148	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	151	152	first strand
Strand 2	a	170	171	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	348	350	first strand
Strand 2	a	369	371	parallel

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There are 11 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	42	47	first strand
Strand 2	b	50	56	anti-parallel
Strand 3	b	62	66	anti-parallel
Strand 4	b	71	76	anti-parallel
Strand 5	b	102	107	anti-parallel
Strand 6	b	178	186	anti-parallel
Strand 7	b	317	323	anti-parallel
Strand 8	b	298	301	anti-parallel
Strand 9	b	257	259	anti-parallel
Strand 10	b	202	204	anti-parallel
Strand 11	b	242	243	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	125	126	first strand
Strand 2	b	137	142	anti-parallel
Strand 3	b	151	157	anti-parallel
Strand 4	b	160	168	anti-parallel
Strand 5	b	336	344	anti-parallel
Strand 6	b	288	294	anti-parallel
Strand 7	b	279	281	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	158	160	first strand
Strand 2	c	130	134	anti-parallel
Strand 3	c	176	179	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	f	91	92	first strand
Strand 2	f	98	100	anti-parallel
Strand 3	f	234	235	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	f	128	129	first strand
Strand 2	f	211	215	anti-parallel
Strand 3	f	194	196	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	f	164	174	first strand
Strand 2	f	179	188	anti-parallel
Strand 3	f	199	202	anti-parallel
Strand 4	f	207	208	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	i	97	102	first strand
Strand 2	i	169	174	anti-parallel
Strand 3	i	202	210	anti-parallel
Strand 4	i	114	122	anti-parallel
Strand 5	i	128	131	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	i	97	102	first strand
Strand 2	i	169	174	anti-parallel
Strand 3	i	202	210	anti-parallel
Strand 4	i	114	122	anti-parallel
Strand 5	i	139	142	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	j	216	219	first strand
Strand 2	j	105	108	anti-parallel
Strand 3	j	88	93	anti-parallel
Strand 4	j	243	249	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	j	140	141	first strand
Strand 2	j	146	149	anti-parallel
Strand 3	j	193	200	anti-parallel
Strand 4	j	183	187	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7WFF

Analysis of interatomic Contacts of Structural Units in PDB entry:
7WFF