Analysis of interatomic Contacts of Structural Units in PDB entry:
7WGE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WGE entry

There are 2 chains in PDB entry 7WGE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 276ARG 987
B
 MET 1LYS 106
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 7WGE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
299 307Right-handed alpha
Helix 2
AA2
A
313 317Right-handed 310
Helix 3
AA3
A
342 354Right-handed alpha
Helix 4
AA4
A
368 375Right-handed alpha
Helix 5
AA5
A
379 388Right-handed alpha
Helix 6
AA6
A
394 400Right-handed alpha
Helix 7
AA7
A
401 403Right-handed 310
Helix 8
AA8
A
435 445Right-handed alpha
Helix 9
AA9
A
482 492Right-handed alpha
Helix 10
AB1
A
496 510Right-handed alpha
Helix 11
AB2
A
510 517Right-handed alpha
Helix 12
AB3
A
519 536Right-handed alpha
Helix 13
AB4
A
546 559Right-handed alpha
Helix 14
AB5
A
565 581Right-handed alpha
Helix 15
AB6
A
587 594Right-handed alpha
Helix 16
AB7
A
597 608Right-handed alpha
Helix 17
AB8
A
623 640Right-handed alpha
Helix 18
AB9
A
655 660Right-handed 310
Helix 19
AC1
A
668 677Right-handed alpha
Helix 20
AC2
A
681 690Right-handed alpha
Helix 21
AC3
A
697 702Right-handed alpha
Helix 22
AC4
A
702 710Right-handed alpha
Helix 23
AC5
A
715 724Right-handed alpha
Helix 24
AC6
A
747 760Right-handed alpha
Helix 25
AC7
A
795 801Right-handed alpha
Helix 26
AC8
A
821 834Right-handed alpha
Helix 27
AC9
A
850 863Right-handed alpha
Helix 28
AD1
A
878 890Right-handed alpha
Helix 29
AD2
A
907 909Right-handed 310
Helix 30
AD3
A
910 921Right-handed alpha
Helix 31
AD4
A
934 947Right-handed alpha
Helix 32
AD5
A
964 978Right-handed alpha
Helix 33
AD6
B
7 19Right-handed alpha
Helix 34
AD7
B
32 49Right-handed alpha
Helix 35
AD8
B
63 71Right-handed alpha
Helix 36
AD9
B
94 106Right-handed alpha
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There are 5 sheets in PDB entry 7WGE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
363 366first strand
Strand 2
A
405 408parallel
Strand 3
A
453 457parallel
Strand 4
A
329 333parallel
Strand 5
A
474 477parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
427 428first strand
Strand 2
B
74 75anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
585 586first strand
Strand 2
A
619 621anti-parallel
Strand 3
A
610 611anti-parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
743 744first strand
Strand 2
A
783 787parallel
Strand 3
A
766 770parallel
Strand 4
A
812 814parallel
Strand 5
A
841 843parallel
Strand 6
A
869 871parallel
Strand 7
A
898 900parallel
Strand 8
A
926 928parallel
Strand 9
A
955 957parallel
Strand 10
A
982 984parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 5first strand
Strand 2
B
53 59parallel
Strand 3
B
22 28parallel
Strand 4
B
77 82anti-parallel
Strand 5
B
85 91anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il