Analysis of interatomic Contacts of Structural Units in PDB entry:
7WGK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WGK entry

There are 2 chains in PDB entry 7WGK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 227
B
 MET 1ARG 227
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 7WGK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 42Right-handed alpha
Helix 2
AA2
A
72 80Right-handed alpha
Helix 3
AA3
A
90 97Right-handed alpha
Helix 4
AA4
A
135 146Right-handed alpha
Helix 5
AA5
A
161 165Right-handed 310
Helix 6
AA6
A
178 184Right-handed alpha
Helix 7
AA7
A
202 209Right-handed alpha
Helix 8
AA8
A
209 224Right-handed alpha
Helix 9
AA9
B
28 41Right-handed alpha
Helix 10
AB1
B
48 52Right-handed 310
Helix 11
AB2
B
70 72Right-handed 310
Helix 12
AB3
B
73 80Right-handed alpha
Helix 13
AB4
B
90 97Right-handed alpha
Helix 14
AB5
B
135 144Right-handed alpha
Helix 15
AB6
B
160 165Right-handed alpha
Helix 16
AB7
B
178 184Right-handed alpha
Helix 17
AB8
B
203 224Right-handed alpha
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There are 5 sheets in PDB entry 7WGK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 58first strand
Strand 2
A
64 68anti-parallel
Strand 3
A
21 25parallel
Strand 4
A
85 89parallel
Strand 5
A
197 201anti-parallel
Strand 6
A
102 106anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 154first strand
Strand 2
A
129 133parallel
Strand 3
A
170 175parallel
Strand 4
A
112 119anti-parallel
Strand 5
A
186 195anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 58first strand
Strand 2
B
64 69anti-parallel
Strand 3
B
21 26parallel
Strand 4
B
85 89parallel
Strand 5
B
197 202anti-parallel
Strand 6
B
101 106anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
151 154first strand
Strand 2
B
130 133parallel
Strand 3
B
170 175parallel
Strand 4
B
112 119anti-parallel
Strand 5
B
186 188anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
151 154first strand
Strand 2
B
130 133parallel
Strand 3
B
170 175parallel
Strand 4
B
112 119anti-parallel
Strand 5
B
193 195anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il