Analysis of interatomic Contacts of Structural Units in PDB entry:
7WHI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WHI entry

There are 7 chains in PDB entry 7WHI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLN 14SER 1147
B
PRO 26SER 1147
C
GLN 14SER 1147
D
GLU 1SER 117
E
GLU 1VAL 116
F
GLU 1VAL 116
G
GLU 1SER 119
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 7WHI. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
294 304Right-handed alpha
Helix 2
AA2
A
338 343Right-handed alpha
Helix 3
AA3
A
386 390Right-handed 310
Helix 4
AA4
A
406 410Right-handed 310
Helix 5
AA5
A
417 422Right-handed alpha
Helix 6
AA6
A
737 743Right-handed alpha
Helix 7
AA7
A
746 753Right-handed alpha
Helix 8
AA8
A
754 757Right-handed 310
Helix 9
AA9
A
758 782Right-handed alpha
Helix 10
AB1
A
816 825Right-handed alpha
Helix 11
AB2
A
849 853Right-handed alpha
Helix 12
AB3
A
854 857Right-handed 310
Helix 13
AB4
A
866 884Right-handed alpha
Helix 14
AB5
A
886 891Right-handed alpha
Helix 15
AB6
A
897 909Right-handed alpha
Helix 16
AB7
A
912 919Right-handed alpha
Helix 17
AB8
A
919 941Right-handed alpha
Helix 18
AB9
A
942 944Right-handed 310
Helix 19
AC1
A
945 965Right-handed alpha
Helix 20
AC2
A
966 968Right-handed 310
Helix 21
AC3
A
976 984Right-handed alpha
Helix 22
AC4
A
985 1033Right-handed alpha
Helix 23
AC5
B
294 304Right-handed alpha
Helix 24
AC6
B
404 408Right-handed 310
Helix 25
AC7
B
417 422Right-handed alpha
Helix 26
AC8
B
737 743Right-handed alpha
Helix 27
AC9
B
746 753Right-handed alpha
Helix 28
AD1
B
754 757Right-handed 310
Helix 29
AD2
B
758 782Right-handed alpha
Helix 30
AD3
B
816 824Right-handed alpha
Helix 31
AD4
B
850 854Right-handed alpha
Helix 32
AD5
B
855 857Right-handed 310
Helix 33
AD6
B
866 884Right-handed alpha
Helix 34
AD7
B
886 891Right-handed alpha
Helix 35
AD8
B
897 909Right-handed alpha
Helix 36
AD9
B
912 919Right-handed alpha
Helix 37
AE1
B
919 941Right-handed alpha
Helix 38
AE2
B
942 944Right-handed 310
Helix 39
AE3
B
945 965Right-handed alpha
Helix 40
AE4
B
976 984Right-handed alpha
Helix 41
AE5
B
985 1033Right-handed alpha
Helix 42
AE6
B
1116 1118Right-handed 310
Helix 43
AE7
C
294 302Right-handed alpha
Helix 44
AE8
C
405 407Right-handed 310
Helix 45
AE9
C
417 422Right-handed alpha
Helix 46
AF1
C
737 743Right-handed alpha
Helix 47
AF2
C
747 754Right-handed alpha
Helix 48
AF3
C
758 782Right-handed alpha
Helix 49
AF4
C
818 826Right-handed alpha
Helix 50
AF5
C
848 852Right-handed 310
Helix 51
AF6
C
853 856Right-handed 310
Helix 52
AF7
C
866 884Right-handed alpha
Helix 53
AF8
C
886 891Right-handed alpha
Helix 54
AF9
C
897 908Right-handed alpha
Helix 55
AG1
C
912 941Right-handed alpha
Helix 56
AG2
C
942 944Right-handed 310
Helix 57
AG3
C
945 965Right-handed alpha
Helix 58
AG4
C
966 968Right-handed 310
Helix 59
AG5
C
976 984Right-handed alpha
Helix 60
AG6
C
985 1033Right-handed alpha
Helix 61
AG7
D
86 90Right-handed 310
Helix 62
AG8
E
86 90Right-handed 310
Helix 63
AG9
G
62 65Right-handed 310
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There are 63 sheets in PDB entry 7WHI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1, AG2, AG3, AG4, AG5, AG6, AG7, AG8, AG9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
28 30first strand
Strand 2
A
61 63anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
48 51first strand
Strand 2
A
275 279anti-parallel
Strand 3
A
285 289anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
66 67first strand
Strand 2
A
263 264anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
84 85first strand
Strand 2
A
237 242anti-parallel
Strand 3
A
101 106anti-parallel
Strand 4
A
117 121anti-parallel
Strand 5
A
126 128anti-parallel
Strand 6
A
170 172anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
224 227first strand
Strand 2
A
198 208anti-parallel
Strand 3
A
185 195anti-parallel
Strand 4
A
90 95anti-parallel
Strand 5
A
268 269anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
311 319first strand
Strand 2
A
592 599anti-parallel
Strand 3
A
609 613anti-parallel
Strand 4
A
648 651anti-parallel
Strand 5
A
642 645anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
394 403first strand
Strand 2
A
507 516anti-parallel
Strand 3
A
432 437anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
452 453first strand
Strand 2
A
493 494anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
538 542first strand
Strand 2
A
547 551anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
584 586first strand
Strand 2
A
575 577anti-parallel
Strand 3
A
565 566anti-parallel
Strand 4
C
42 43parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
654 655first strand
Strand 2
A
691 696parallel
Strand 3
A
670 675anti-parallel
Strand 4
A
664 667anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
701 703first strand
Strand 2
C
787 789parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
711 728first strand
Strand 2
A
1059 1076anti-parallel
Strand 3
A
1047 1056anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
734 735first strand
Strand 2
A
859 860anti-parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
787 789first strand
Strand 2
B
701 703parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1120 1125first strand
Strand 2
A
1086 1090anti-parallel
Strand 3
A
1081 1082anti-parallel
Strand 4
A
1133 1134parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1094 1097first strand
Strand 2
A
1102 1105anti-parallel
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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
28 30first strand
Strand 2
B
61 63anti-parallel
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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
42 43first strand
Strand 2
C
565 566parallel
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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
47 51first strand
Strand 2
B
275 279anti-parallel
Strand 3
B
285 289anti-parallel
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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
54 55first strand
Strand 2
B
271 272anti-parallel
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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
66 67first strand
Strand 2
B
263 264anti-parallel
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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
84 85first strand
Strand 2
B
237 242anti-parallel
Strand 3
B
101 107anti-parallel
Strand 4
B
116 120anti-parallel
Strand 5
B
127 131anti-parallel
Strand 6
B
168 170anti-parallel
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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
224 230first strand
Strand 2
B
198 208anti-parallel
Strand 3
B
185 195anti-parallel
Strand 4
B
89 96anti-parallel
Strand 5
B
268 269anti-parallel
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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
311 316first strand
Strand 2
B
594 599anti-parallel
Strand 3
B
609 613anti-parallel
Strand 4
B
648 651anti-parallel
Strand 5
B
642 644anti-parallel
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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
354 358first strand
Strand 2
B
395 402anti-parallel
Strand 3
B
508 514anti-parallel
Strand 4
B
431 437anti-parallel
Strand 5
B
374 380anti-parallel
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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
361 362first strand
Strand 2
B
524 525parallel
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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
452 454first strand
Strand 2
B
492 494anti-parallel
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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
538 542first strand
Strand 2
B
547 552anti-parallel
Strand 3
B
587 588anti-parallel
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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
565 566first strand
Strand 2
B
575 576anti-parallel
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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
654 655first strand
Strand 2
B
691 696parallel
Strand 3
B
670 675anti-parallel
Strand 4
B
664 667anti-parallel
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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
711 722first strand
Strand 2
B
1059 1076anti-parallel
Strand 3
B
725 728anti-parallel
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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
711 722first strand
Strand 2
B
1059 1076anti-parallel
Strand 3
B
1047 1056anti-parallel
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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
733 735first strand
Strand 2
B
859 861anti-parallel
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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
787 789first strand
Strand 2
C
701 703parallel
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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1120 1125first strand
Strand 2
B
1086 1090anti-parallel
Strand 3
B
1081 1082anti-parallel
Strand 4
B
1133 1134parallel
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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1094 1097first strand
Strand 2
B
1102 1106anti-parallel
Strand 3
B
1109 1114anti-parallel
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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
28 30first strand
Strand 2
C
61 63anti-parallel
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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
48 51first strand
Strand 2
C
275 279anti-parallel
Strand 3
C
285 289anti-parallel
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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
54 55first strand
Strand 2
C
271 272anti-parallel
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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
65 67first strand
Strand 2
C
263 265anti-parallel
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There are 6 strands in AE6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
84 85first strand
Strand 2
C
237 240anti-parallel
Strand 3
C
103 107anti-parallel
Strand 4
C
116 121anti-parallel
Strand 5
C
126 131anti-parallel
Strand 6
C
168 172anti-parallel
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There are 5 strands in AE7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
224 229first strand
Strand 2
C
199 208anti-parallel
Strand 3
C
185 194anti-parallel
Strand 4
C
89 96anti-parallel
Strand 5
C
268 269anti-parallel
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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
311 319first strand
Strand 2
C
592 599anti-parallel
Strand 3
C
609 613anti-parallel
Strand 4
C
650 651anti-parallel
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There are 5 strands in AE9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
356 358first strand
Strand 2
C
395 403anti-parallel
Strand 3
C
507 515anti-parallel
Strand 4
C
431 435anti-parallel
Strand 5
C
378 379anti-parallel
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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
452 453first strand
Strand 2
C
493 494anti-parallel
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There are 4 strands in AF2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
539 542first strand
Strand 2
C
547 554anti-parallel
Strand 3
C
584 588anti-parallel
Strand 4
C
575 577anti-parallel
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There are 4 strands in AF3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
654 655first strand
Strand 2
C
691 696parallel
Strand 3
C
670 675anti-parallel
Strand 4
C
664 667anti-parallel
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There are 3 strands in AF4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
711 728first strand
Strand 2
C
1059 1076anti-parallel
Strand 3
C
1047 1056anti-parallel
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There are 2 strands in AF5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
734 736first strand
Strand 2
C
858 860anti-parallel
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There are 4 strands in AF6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1120 1122first strand
Strand 2
C
1087 1090anti-parallel
Strand 3
C
1081 1082anti-parallel
Strand 4
C
1133 1134parallel
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There are 2 strands in AF7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1094 1097first strand
Strand 2
C
1102 1105anti-parallel
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There are 2 strands in AF8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
5 6first strand
Strand 2
D
22 23anti-parallel
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There are 2 strands in AF9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
11 12first strand
Strand 2
D
115 116parallel
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There are 3 strands in AG1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
17 20first strand
Strand 2
D
80 83anti-parallel
Strand 3
D
67 68anti-parallel
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There are 4 strands in AG2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
46 50first strand
Strand 2
D
35 38anti-parallel
Strand 3
D
92 94anti-parallel
Strand 4
D
112 113anti-parallel
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There are 2 strands in AG3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
5 7first strand
Strand 2
E
21 23anti-parallel
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There are 4 strands in AG4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
47 51first strand
Strand 2
E
34 38anti-parallel
Strand 3
E
91 96anti-parallel
Strand 4
E
112 114anti-parallel
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There are 2 strands in AG5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
5 7first strand
Strand 2
F
21 23anti-parallel
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There are 5 strands in AG6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
57 58first strand
Strand 2
F
46 51anti-parallel
Strand 3
F
34 38anti-parallel
Strand 4
F
91 94anti-parallel
Strand 5
F
113 114anti-parallel
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There are 4 strands in AG7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
5 7first strand
Strand 2
G
18 23anti-parallel
Strand 3
G
78 83anti-parallel
Strand 4
G
68 73anti-parallel
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There are 6 strands in AG8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
11 12first strand
Strand 2
G
114 118parallel
Strand 3
G
92 99anti-parallel
Strand 4
G
33 39anti-parallel
Strand 5
G
45 52anti-parallel
Strand 6
G
58 60anti-parallel
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There are 4 strands in AG9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
11 12first strand
Strand 2
G
114 118parallel
Strand 3
G
92 99anti-parallel
Strand 4
G
109 110anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il