Analysis of interatomic Contacts of Structural Units in PDB entry:
7WHP

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7WHP entry

There are 2 chains in PDB entry 7WHP (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ARG 1057
B	MET 1	ARG 1057

There are 81 helices in PDB entry 7WHP. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	10	15	Right-handed alpha
Helix 2	AA2	A	21	26	Right-handed alpha
Helix 3	AA3	A	63	68	Right-handed alpha
Helix 4	AA4	A	73	77	Right-handed 310
Helix 5	AA5	A	84	97	Right-handed alpha
Helix 6	AA6	A	114	124	Right-handed alpha
Helix 7	AA7	A	128	137	Right-handed alpha
Helix 8	AA8	A	138	140	Right-handed 310
Helix 9	AA9	A	145	158	Right-handed alpha
Helix 10	AB1	A	188	200	Right-handed alpha
Helix 11	AB2	A	211	215	Right-handed 310
Helix 12	AB3	A	223	247	Right-handed alpha
Helix 13	AB4	A	266	279	Right-handed alpha
Helix 14	AB5	A	280	285	Right-handed alpha
Helix 15	AB6	A	292	306	Right-handed alpha
Helix 16	AB7	A	309	322	Right-handed alpha
Helix 17	AB8	A	330	343	Right-handed alpha
Helix 18	AB9	A	412	416	Right-handed 310
Helix 19	AC1	A	430	447	Right-handed alpha
Helix 20	AC2	A	450	460	Right-handed alpha
Helix 21	AC3	A	466	480	Right-handed alpha
Helix 22	AC4	A	489	499	Right-handed alpha
Helix 23	AC5	A	529	543	Right-handed alpha
Helix 24	AC6	A	566	576	Right-handed alpha
Helix 25	AC7	A	624	643	Right-handed alpha
Helix 26	AC8	A	654	667	Right-handed alpha
Helix 27	AC9	A	712	717	Right-handed alpha
Helix 28	AD1	A	754	762	Right-handed alpha
Helix 29	AD2	A	763	765	Right-handed 310
Helix 30	AD3	A	788	795	Right-handed alpha
Helix 31	AD4	A	804	809	Right-handed alpha
Helix 32	AD5	A	832	852	Right-handed alpha
Helix 33	AD6	A	866	871	Right-handed 310
Helix 34	AD7	A	888	894	Right-handed alpha
Helix 35	AD8	A	935	951	Right-handed alpha
Helix 36	AD9	A	965	972	Right-handed alpha
Helix 37	AE1	A	999	1011	Right-handed alpha
Helix 38	AE2	A	1020	1031	Right-handed alpha
Helix 39	AE3	A	1036	1049	Right-handed alpha
Helix 40	AE4	B	10	15	Right-handed alpha
Helix 41	AE5	B	18	20	Right-handed 310
Helix 42	AE6	B	21	26	Right-handed alpha
Helix 43	AE7	B	63	68	Right-handed alpha
Helix 44	AE8	B	69	74	Right-handed 310
Helix 45	AE9	B	84	97	Right-handed alpha
Helix 46	AF1	B	114	124	Right-handed alpha
Helix 47	AF2	B	128	135	Right-handed alpha
Helix 48	AF3	B	137	140	Right-handed 310
Helix 49	AF4	B	147	158	Right-handed alpha
Helix 50	AF5	B	188	200	Right-handed alpha
Helix 51	AF6	B	211	215	Right-handed 310
Helix 52	AF7	B	223	248	Right-handed alpha
Helix 53	AF8	B	266	277	Right-handed alpha
Helix 54	AF9	B	280	285	Right-handed alpha
Helix 55	AG1	B	292	306	Right-handed alpha
Helix 56	AG2	B	310	322	Right-handed alpha
Helix 57	AG3	B	330	341	Right-handed alpha
Helix 58	AG4	B	412	416	Right-handed 310
Helix 59	AG5	B	430	447	Right-handed alpha
Helix 60	AG6	B	450	460	Right-handed alpha
Helix 61	AG7	B	461	466	Right-handed alpha
Helix 62	AG8	B	466	480	Right-handed alpha
Helix 63	AG9	B	489	497	Right-handed alpha
Helix 64	AH1	B	528	543	Right-handed alpha
Helix 65	AH2	B	566	576	Right-handed alpha
Helix 66	AH3	B	624	642	Right-handed alpha
Helix 67	AH4	B	654	666	Right-handed alpha
Helix 68	AH5	B	709	718	Right-handed alpha
Helix 69	AH6	B	754	760	Right-handed alpha
Helix 70	AH7	B	761	765	Right-handed 310
Helix 71	AH8	B	788	795	Right-handed alpha
Helix 72	AH9	B	804	809	Right-handed alpha
Helix 73	AI1	B	810	812	Right-handed 310
Helix 74	AI2	B	832	852	Right-handed alpha
Helix 75	AI3	B	866	871	Right-handed 310
Helix 76	AI4	B	888	895	Right-handed alpha
Helix 77	AI5	B	935	951	Right-handed alpha
Helix 78	AI6	B	965	972	Right-handed alpha
Helix 79	AI7	B	999	1011	Right-handed alpha
Helix 80	AI8	B	1020	1031	Right-handed alpha
Helix 81	AI9	B	1036	1049	Right-handed alpha

There are 27 sheets in PDB entry 7WHP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	5	8	first strand
Strand 2	A	250	253	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	38	43	first strand
Strand 2	A	48	53	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	112	113	first strand
Strand 2	A	142	143	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	161	165	first strand
Strand 2	A	179	184	anti-parallel
Strand 3	A	217	221	anti-parallel
Strand 4	A	205	207	anti-parallel
Strand 5	A	261	264	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	326	329	first strand
Strand 2	A	352	355	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	375	376	first strand
Strand 2	A	768	773	anti-parallel
Strand 3	A	780	786	anti-parallel
Strand 4	A	744	751	anti-parallel
Strand 5	A	729	731	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	375	376	first strand
Strand 2	A	768	773	anti-parallel
Strand 3	A	817	818	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	383	384	first strand
Strand 2	A	802	803	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	391	392	first strand
Strand 2	A	733	734	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	401	406	first strand
Strand 2	A	823	830	parallel
Strand 3	A	1033	1034	parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	419	422	first strand
Strand 2	A	673	680	anti-parallel
Strand 3	A	690	696	anti-parallel
Strand 4	A	645	650	anti-parallel
Strand 5	A	612	615	parallel
Strand 6	A	556	560	parallel
Strand 7	A	583	588	parallel
Strand 8	A	596	597	parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	898	900	first strand
Strand 2	A	879	881	parallel
Strand 3	A	858	860	parallel
Strand 4	A	916	921	parallel
Strand 5	A	955	961	parallel
Strand 6	A	1052	1056	anti-parallel
Strand 7	A	1016	1017	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	980	983	first strand
Strand 2	A	986	989	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	5	8	first strand
Strand 2	B	250	253	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	38	43	first strand
Strand 2	B	48	53	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	112	113	first strand
Strand 2	B	142	143	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	161	165	first strand
Strand 2	B	179	184	anti-parallel
Strand 3	B	217	221	anti-parallel
Strand 4	B	205	207	anti-parallel
Strand 5	B	261	264	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	326	329	first strand
Strand 2	B	352	355	parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	373	376	first strand
Strand 2	B	768	773	anti-parallel
Strand 3	B	780	786	anti-parallel
Strand 4	B	744	751	anti-parallel
Strand 5	B	729	730	parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	373	376	first strand
Strand 2	B	768	773	anti-parallel
Strand 3	B	817	818	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	383	384	first strand
Strand 2	B	802	803	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	391	392	first strand
Strand 2	B	733	734	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	401	406	first strand
Strand 2	B	823	830	parallel
Strand 3	B	1033	1034	parallel

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There are 8 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	419	422	first strand
Strand 2	B	673	680	anti-parallel
Strand 3	B	690	696	anti-parallel
Strand 4	B	646	650	anti-parallel
Strand 5	B	613	615	parallel
Strand 6	B	558	560	parallel
Strand 7	B	586	588	parallel
Strand 8	B	596	597	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	505	507	first strand
Strand 2	B	510	511	anti-parallel

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There are 7 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	897	900	first strand
Strand 2	B	877	881	parallel
Strand 3	B	857	860	parallel
Strand 4	B	916	921	parallel
Strand 5	B	955	961	parallel
Strand 6	B	1052	1056	anti-parallel
Strand 7	B	1016	1017	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	980	982	first strand
Strand 2	B	987	989	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7WHP

Analysis of interatomic Contacts of Structural Units in PDB entry:
7WHP