Analysis of interatomic Contacts of Structural Units in PDB entry:
7WI4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7WI4 entry

There are 6 chains in PDB entry 7WI4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 141	TRP 604
D	MET 141	TRP 604
E	MET 141	TRP 604
F	MET 141	TRP 604
B	MET 141	TRP 604
C	MET 141	TRP 604

There are110 helices in PDB entry 7WI4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	157	172	Right-handed alpha
Helix 2	AA2	A	173	177	Right-handed 310
Helix 3	AA3	A	201	208	Right-handed alpha
Helix 4	AA4	A	209	211	Right-handed 310
Helix 5	AA5	A	232	240	Right-handed alpha
Helix 6	AA6	A	274	286	Right-handed alpha
Helix 7	AA7	A	323	335	Right-handed alpha
Helix 8	AA8	A	345	353	Right-handed alpha
Helix 9	AA9	A	357	375	Right-handed alpha
Helix 10	AB1	A	381	394	Right-handed alpha
Helix 11	AB2	A	404	416	Right-handed alpha
Helix 12	AB3	A	419	423	Right-handed 310
Helix 13	AB4	A	458	481	Right-handed alpha
Helix 14	AB5	A	489	507	Right-handed alpha
Helix 15	AB6	A	538	567	Right-handed alpha
Helix 16	AB7	A	567	581	Right-handed alpha
Helix 17	AB8	A	585	594	Right-handed alpha
Helix 18	AB9	D	157	172	Right-handed alpha
Helix 19	AC1	D	173	177	Right-handed 310
Helix 20	AC2	D	199	208	Right-handed alpha
Helix 21	AC3	D	209	211	Right-handed 310
Helix 22	AC4	D	232	240	Right-handed alpha
Helix 23	AC5	D	273	285	Right-handed alpha
Helix 24	AC6	D	323	334	Right-handed alpha
Helix 25	AC7	D	335	338	Right-handed 310
Helix 26	AC8	D	345	352	Right-handed alpha
Helix 27	AC9	D	357	376	Right-handed alpha
Helix 28	AD1	D	381	394	Right-handed alpha
Helix 29	AD2	D	404	415	Right-handed alpha
Helix 30	AD3	D	417	425	Right-handed alpha
Helix 31	AD4	D	458	470	Right-handed alpha
Helix 32	AD5	D	470	481	Right-handed alpha
Helix 33	AD6	D	489	507	Right-handed alpha
Helix 34	AD7	D	540	567	Right-handed alpha
Helix 35	AD8	D	567	581	Right-handed alpha
Helix 36	AD9	D	585	594	Right-handed alpha
Helix 37	AE1	E	157	172	Right-handed alpha
Helix 38	AE2	E	173	177	Right-handed 310
Helix 39	AE3	E	200	207	Right-handed alpha
Helix 40	AE4	E	208	211	Right-handed 310
Helix 41	AE5	E	232	238	Right-handed alpha
Helix 42	AE6	E	273	286	Right-handed alpha
Helix 43	AE7	E	323	334	Right-handed alpha
Helix 44	AE8	E	345	353	Right-handed alpha
Helix 45	AE9	E	357	376	Right-handed alpha
Helix 46	AF1	E	381	394	Right-handed alpha
Helix 47	AF2	E	404	425	Right-handed alpha
Helix 48	AF3	E	458	470	Right-handed alpha
Helix 49	AF4	E	470	481	Right-handed alpha
Helix 50	AF5	E	486	488	Right-handed 310
Helix 51	AF6	E	489	506	Right-handed alpha
Helix 52	AF7	E	538	567	Right-handed alpha
Helix 53	AF8	E	567	581	Right-handed alpha
Helix 54	AF9	E	585	594	Right-handed alpha
Helix 55	AG1	F	157	172	Right-handed alpha
Helix 56	AG2	F	173	177	Right-handed 310
Helix 57	AG3	F	201	208	Right-handed alpha
Helix 58	AG4	F	209	211	Right-handed 310
Helix 59	AG5	F	232	240	Right-handed alpha
Helix 60	AG6	F	274	284	Right-handed alpha
Helix 61	AG7	F	323	335	Right-handed alpha
Helix 62	AG8	F	336	338	Right-handed 310
Helix 63	AG9	F	345	353	Right-handed alpha
Helix 64	AH1	F	357	376	Right-handed alpha
Helix 65	AH2	F	382	394	Right-handed alpha
Helix 66	AH3	F	404	419	Right-handed alpha
Helix 67	AH4	F	419	425	Right-handed alpha
Helix 68	AH5	F	458	481	Right-handed alpha
Helix 69	AH6	F	482	485	Right-handed 310
Helix 70	AH7	F	493	506	Right-handed alpha
Helix 71	AH8	F	539	567	Right-handed alpha
Helix 72	AH9	F	567	581	Right-handed alpha
Helix 73	AI1	F	585	595	Right-handed alpha
Helix 74	AI2	B	157	172	Right-handed alpha
Helix 75	AI3	B	173	177	Right-handed 310
Helix 76	AI4	B	197	208	Right-handed alpha
Helix 77	AI5	B	209	211	Right-handed 310
Helix 78	AI6	B	233	240	Right-handed alpha
Helix 79	AI7	B	272	286	Right-handed alpha
Helix 80	AI8	B	323	335	Right-handed alpha
Helix 81	AI9	B	336	338	Right-handed 310
Helix 82	AJ1	B	345	352	Right-handed alpha
Helix 83	AJ2	B	357	375	Right-handed alpha
Helix 84	AJ3	B	381	394	Right-handed alpha
Helix 85	AJ4	B	404	419	Right-handed alpha
Helix 86	AJ5	B	419	425	Right-handed alpha
Helix 87	AJ6	B	458	470	Right-handed alpha
Helix 88	AJ7	B	470	481	Right-handed alpha
Helix 89	AJ8	B	489	506	Right-handed alpha
Helix 90	AJ9	B	540	567	Right-handed alpha
Helix 91	AK1	B	567	581	Right-handed alpha
Helix 92	AK2	B	585	594	Right-handed alpha
Helix 93	AK3	C	157	171	Right-handed alpha
Helix 94	AK4	C	173	177	Right-handed 310
Helix 95	AK5	C	199	208	Right-handed alpha
Helix 96	AK6	C	209	211	Right-handed 310
Helix 97	AK7	C	232	240	Right-handed alpha
Helix 98	AK8	C	273	286	Right-handed alpha
Helix 99	AK9	C	323	335	Right-handed alpha
Helix 100	AL1	C	345	353	Right-handed alpha
Helix 101	AL2	C	357	376	Right-handed alpha
Helix 102	AL3	C	382	394	Right-handed alpha
Helix 103	AL4	C	404	425	Right-handed alpha
Helix 104	AL5	C	458	470	Right-handed alpha
Helix 105	AL6	C	470	480	Right-handed alpha
Helix 106	AL7	C	486	488	Right-handed 310
Helix 107	AL8	C	489	506	Right-handed alpha
Helix 108	AL9	C	538	567	Right-handed alpha
Helix 109	AM1	C	567	581	Right-handed alpha
Helix 110	AM2	C	585	594	Right-handed alpha

There are 13 sheets in PDB entry 7WI4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	248	249	first strand
Strand 2	A	293	296	parallel
Strand 3	A	188	190	parallel
Strand 4	A	315	316	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	445	448	first strand
Strand 2	A	431	435	anti-parallel
Strand 3	A	583	584	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	247	249	first strand
Strand 2	D	292	296	parallel
Strand 3	D	188	190	parallel
Strand 4	D	315	316	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	445	448	first strand
Strand 2	D	431	435	anti-parallel
Strand 3	D	583	584	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	248	249	first strand
Strand 2	E	293	296	parallel
Strand 3	E	188	190	parallel
Strand 4	E	315	317	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	446	448	first strand
Strand 2	E	431	435	anti-parallel
Strand 3	E	583	584	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	188	189	first strand
Strand 2	F	315	316	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	248	249	first strand
Strand 2	F	293	294	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	445	448	first strand
Strand 2	F	431	435	anti-parallel
Strand 3	F	583	584	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	294	296	first strand
Strand 2	B	188	190	parallel
Strand 3	B	315	317	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	445	448	first strand
Strand 2	B	431	435	anti-parallel
Strand 3	B	583	584	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	293	296	first strand
Strand 2	C	187	190	parallel
Strand 3	C	315	317	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	445	448	first strand
Strand 2	C	431	435	anti-parallel
Strand 3	C	583	584	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7WI4

Analysis of interatomic Contacts of Structural Units in PDB entry:
7WI4