Analysis of interatomic Contacts of Structural Units in PDB entry:
7WI8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WI8 entry

There are 2 chains in PDB entry 7WI8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ARG 31VAL 823
B
ARG 31VAL 823
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 65 helices in PDB entry 7WI8. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
65 80Right-handed alpha
Helix 2
AA2
A
101 114Right-handed alpha
Helix 3
AA3
A
150 155Right-handed alpha
Helix 4
AA4
A
200 203Right-handed 310
Helix 5
AA5
A
204 209Right-handed alpha
Helix 6
AA6
A
222 232Right-handed alpha
Helix 7
AA7
A
278 280Right-handed 310
Helix 8
AA8
A
281 286Right-handed alpha
Helix 9
AA9
A
287 292Right-handed alpha
Helix 10
AB1
A
330 338Right-handed alpha
Helix 11
AB2
A
350 360Right-handed alpha
Helix 12
AB3
A
389 397Right-handed alpha
Helix 13
AB4
A
397 406Right-handed alpha
Helix 14
AB5
A
406 411Right-handed alpha
Helix 15
AB6
A
427 435Right-handed alpha
Helix 16
AB7
A
514 518Right-handed 310
Helix 17
AB8
A
578 589Right-handed alpha
Helix 18
AB9
A
589 595Right-handed alpha
Helix 19
AC1
A
614 619Right-handed alpha
Helix 20
AC2
A
620 633Right-handed alpha
Helix 21
AC3
A
637 646Right-handed alpha
Helix 22
AC4
A
647 650Right-handed 310
Helix 23
AC5
A
651 656Right-handed alpha
Helix 24
AC6
A
656 667Right-handed alpha
Helix 25
AC7
A
688 697Right-handed 310
Helix 26
AC8
A
698 708Right-handed alpha
Helix 27
AC9
A
733 741Right-handed alpha
Helix 28
AD1
A
741 748Right-handed alpha
Helix 29
AD2
A
749 751Right-handed 310
Helix 30
AD3
A
752 758Right-handed alpha
Helix 31
AD4
A
771 789Right-handed alpha
Helix 32
AD5
A
795 814Right-handed alpha
Helix 33
AD6
A
814 820Right-handed alpha
Helix 34
AD7
B
65 80Right-handed alpha
Helix 35
AD8
B
101 114Right-handed alpha
Helix 36
AD9
B
150 155Right-handed alpha
Helix 37
AE1
B
200 203Right-handed 310
Helix 38
AE2
B
204 209Right-handed alpha
Helix 39
AE3
B
222 232Right-handed alpha
Helix 40
AE4
B
278 280Right-handed 310
Helix 41
AE5
B
281 286Right-handed alpha
Helix 42
AE6
B
287 292Right-handed alpha
Helix 43
AE7
B
330 338Right-handed alpha
Helix 44
AE8
B
350 360Right-handed alpha
Helix 45
AE9
B
389 397Right-handed alpha
Helix 46
AF1
B
397 406Right-handed alpha
Helix 47
AF2
B
406 411Right-handed alpha
Helix 48
AF3
B
427 435Right-handed alpha
Helix 49
AF4
B
514 518Right-handed 310
Helix 50
AF5
B
578 589Right-handed alpha
Helix 51
AF6
B
589 595Right-handed alpha
Helix 52
AF7
B
614 619Right-handed alpha
Helix 53
AF8
B
620 633Right-handed alpha
Helix 54
AF9
B
637 649Right-handed alpha
Helix 55
AG1
B
651 656Right-handed alpha
Helix 56
AG2
B
656 667Right-handed alpha
Helix 57
AG3
B
688 697Right-handed 310
Helix 58
AG4
B
698 708Right-handed alpha
Helix 59
AG5
B
733 741Right-handed alpha
Helix 60
AG6
B
741 748Right-handed alpha
Helix 61
AG7
B
749 751Right-handed 310
Helix 62
AG8
B
752 758Right-handed alpha
Helix 63
AG9
B
771 789Right-handed alpha
Helix 64
AH1
B
795 814Right-handed alpha
Helix 65
AH2
B
814 820Right-handed alpha
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There are 6 sheets in PDB entry 7WI8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
33 35first strand
Strand 2
A
91 95anti-parallel
Strand 3
A
39 43parallel
Strand 4
A
142 146parallel
Strand 5
A
168 169parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
240 246first strand
Strand 2
A
212 217parallel
Strand 3
A
272 274parallel
Strand 4
A
297 299parallel
Strand 5
A
320 325parallel
Strand 6
A
466 470anti-parallel
Strand 7
A
481 486anti-parallel
Strand 8
A
490 492anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
538 539first strand
Strand 2
A
547 548anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
33 35first strand
Strand 2
B
91 95anti-parallel
Strand 3
B
39 43parallel
Strand 4
B
142 146parallel
Strand 5
B
168 169parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
240 246first strand
Strand 2
B
212 217parallel
Strand 3
B
272 274parallel
Strand 4
B
297 299parallel
Strand 5
B
320 325parallel
Strand 6
B
466 470anti-parallel
Strand 7
B
481 486anti-parallel
Strand 8
B
490 492anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
538 539first strand
Strand 2
B
547 548anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il