Analysis of interatomic Contacts of Structural Units in PDB entry:
7WIV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WIV entry

There are 2 chains in PDB entry 7WIV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 276GLY 846
B
 THR 4GLU 579
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 7WIV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
280 286Right-handed alpha
Helix 2
AA2
A
290 306Right-handed alpha
Helix 3
AA3
A
309 323Right-handed alpha
Helix 4
AA4
A
330 375Right-handed alpha
Helix 5
AA5
A
378 385Right-handed alpha
Helix 6
AA6
A
387 395Right-handed alpha
Helix 7
AA7
A
395 407Right-handed alpha
Helix 8
AA8
A
407 430Right-handed alpha
Helix 9
AA9
A
430 437Right-handed alpha
Helix 10
AB1
A
438 453Right-handed alpha
Helix 11
AB2
A
457 479Right-handed alpha
Helix 12
AB3
A
479 486Right-handed alpha
Helix 13
AB4
A
487 489Right-handed 310
Helix 14
AB5
A
490 509Right-handed alpha
Helix 15
AB6
A
510 513Right-handed 310
Helix 16
AB7
A
516 521Right-handed alpha
Helix 17
AB8
A
523 541Right-handed alpha
Helix 18
AB9
A
545 548Right-handed 310
Helix 19
AC1
A
549 556Right-handed alpha
Helix 20
AC2
A
558 571Right-handed alpha
Helix 21
AC3
A
573 587Right-handed alpha
Helix 22
AC4
A
648 655Right-handed alpha
Helix 23
AC5
A
675 677Right-handed 310
Helix 24
AC6
A
678 684Right-handed alpha
Helix 25
AC7
A
700 705Right-handed alpha
Helix 26
AC8
A
714 719Right-handed alpha
Helix 27
AC9
A
725 731Right-handed alpha
Helix 28
AD1
A
734 737Right-handed 310
Helix 29
AD2
A
751 763Right-handed alpha
Helix 30
AD3
A
772 774Right-handed 310
Helix 31
AD4
A
778 781Right-handed 310
Helix 32
AD5
A
782 792Right-handed alpha
Helix 33
AD6
A
826 831Right-handed alpha
Helix 34
AD7
A
836 842Right-handed alpha
Helix 35
AD8
B
17 25Right-handed alpha
Helix 36
AD9
B
25 37Right-handed alpha
Helix 37
AE1
B
37 46Right-handed alpha
Helix 38
AE2
B
49 53Right-handed 310
Helix 39
AE3
B
54 97Right-handed alpha
Helix 40
AE4
B
101 105Right-handed 310
Helix 41
AE5
B
106 119Right-handed alpha
Helix 42
AE6
B
121 126Right-handed alpha
Helix 43
AE7
B
131 150Right-handed alpha
Helix 44
AE8
B
153 162Right-handed alpha
Helix 45
AE9
B
162 193Right-handed alpha
Helix 46
AF1
B
194 202Right-handed alpha
Helix 47
AF2
B
202 208Right-handed alpha
Helix 48
AF3
B
211 226Right-handed alpha
Helix 49
AF4
B
229 265Right-handed alpha
Helix 50
AF5
B
269 284Right-handed alpha
Helix 51
AF6
B
284 293Right-handed alpha
Helix 52
AF7
B
294 312Right-handed alpha
Helix 53
AF8
B
372 381Right-handed alpha
Helix 54
AF9
B
398 400Right-handed 310
Helix 55
AG1
B
422 428Right-handed alpha
Helix 56
AG2
B
439 444Right-handed alpha
Helix 57
AG3
B
448 453Right-handed alpha
Helix 58
AG4
B
457 461Right-handed 310
Helix 59
AG5
B
477 486Right-handed alpha
Helix 60
AG6
B
503 514Right-handed alpha
Helix 61
AG7
B
554 558Right-handed 310
Helix 62
AG8
B
559 571Right-handed alpha
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There are 7 sheets in PDB entry 7WIV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
610 613first strand
Strand 2
A
666 669anti-parallel
Strand 3
A
672 673anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
615 617first strand
Strand 2
A
626 629anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
687 689first strand
Strand 2
A
766 770parallel
Strand 3
A
796 800parallel
Strand 4
A
638 642parallel
Strand 5
A
812 816parallel
Strand 6
A
821 825anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
698 699first strand
Strand 2
A
739 740anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
355 356first strand
Strand 2
B
332 333anti-parallel
Strand 3
B
391 392anti-parallel
Strand 4
B
395 396anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
337 339first strand
Strand 2
B
349 352anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
410 412first strand
Strand 2
B
490 494parallel
Strand 3
B
520 524parallel
Strand 4
B
361 365parallel
Strand 5
B
536 541parallel
Strand 6
B
544 549anti-parallel
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