Analysis of interatomic Contacts of Structural Units in PDB entry:
7WJ4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7WJ4 entry

There are 4 chains in PDB entry 7WJ4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	MET 1	GLN 556
A	MET 1	GLN 556
B	MET 1	GLN 556
C	MET 1	GLN 556

There are104 helices in PDB entry 7WJ4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	15	30	Right-handed alpha
Helix 2	AA2	D	46	50	Right-handed 310
Helix 3	AA3	D	69	79	Right-handed alpha
Helix 4	AA4	D	83	85	Right-handed 310
Helix 5	AA5	D	90	104	Right-handed alpha
Helix 6	AA6	D	112	129	Right-handed alpha
Helix 7	AA7	D	155	169	Right-handed alpha
Helix 8	AA8	D	170	172	Right-handed 310
Helix 9	AA9	D	193	205	Right-handed alpha
Helix 10	AB1	D	222	234	Right-handed alpha
Helix 11	AB2	D	248	250	Right-handed 310
Helix 12	AB3	D	251	258	Right-handed alpha
Helix 13	AB4	D	262	269	Right-handed alpha
Helix 14	AB5	D	274	279	Right-handed alpha
Helix 15	AB6	D	280	282	Right-handed 310
Helix 16	AB7	D	283	292	Right-handed alpha
Helix 17	AB8	D	314	329	Right-handed alpha
Helix 18	AB9	D	343	348	Right-handed alpha
Helix 19	AC1	D	350	363	Right-handed alpha
Helix 20	AC2	D	377	391	Right-handed alpha
Helix 21	AC3	D	400	415	Right-handed alpha
Helix 22	AC4	D	462	468	Right-handed alpha
Helix 23	AC5	D	488	494	Right-handed alpha
Helix 24	AC6	D	526	531	Right-handed 310
Helix 25	AC7	D	537	549	Right-handed alpha
Helix 26	AC8	D	550	556	Right-handed alpha
Helix 27	AC9	A	15	30	Right-handed alpha
Helix 28	AD1	A	46	50	Right-handed 310
Helix 29	AD2	A	69	79	Right-handed alpha
Helix 30	AD3	A	83	85	Right-handed 310
Helix 31	AD4	A	90	104	Right-handed alpha
Helix 32	AD5	A	112	129	Right-handed alpha
Helix 33	AD6	A	155	169	Right-handed alpha
Helix 34	AD7	A	170	172	Right-handed 310
Helix 35	AD8	A	193	205	Right-handed alpha
Helix 36	AD9	A	222	234	Right-handed alpha
Helix 37	AE1	A	248	250	Right-handed 310
Helix 38	AE2	A	251	258	Right-handed alpha
Helix 39	AE3	A	262	269	Right-handed alpha
Helix 40	AE4	A	274	279	Right-handed alpha
Helix 41	AE5	A	280	282	Right-handed 310
Helix 42	AE6	A	283	292	Right-handed alpha
Helix 43	AE7	A	314	329	Right-handed alpha
Helix 44	AE8	A	343	348	Right-handed alpha
Helix 45	AE9	A	350	363	Right-handed alpha
Helix 46	AF1	A	377	391	Right-handed alpha
Helix 47	AF2	A	400	415	Right-handed alpha
Helix 48	AF3	A	462	468	Right-handed alpha
Helix 49	AF4	A	488	494	Right-handed alpha
Helix 50	AF5	A	526	531	Right-handed 310
Helix 51	AF6	A	537	549	Right-handed alpha
Helix 52	AF7	A	550	556	Right-handed alpha
Helix 53	AF8	B	15	30	Right-handed alpha
Helix 54	AF9	B	46	50	Right-handed 310
Helix 55	AG1	B	69	79	Right-handed alpha
Helix 56	AG2	B	83	85	Right-handed 310
Helix 57	AG3	B	90	104	Right-handed alpha
Helix 58	AG4	B	112	129	Right-handed alpha
Helix 59	AG5	B	155	169	Right-handed alpha
Helix 60	AG6	B	170	172	Right-handed 310
Helix 61	AG7	B	193	205	Right-handed alpha
Helix 62	AG8	B	222	234	Right-handed alpha
Helix 63	AG9	B	248	250	Right-handed 310
Helix 64	AH1	B	251	258	Right-handed alpha
Helix 65	AH2	B	262	269	Right-handed alpha
Helix 66	AH3	B	274	279	Right-handed alpha
Helix 67	AH4	B	280	282	Right-handed 310
Helix 68	AH5	B	283	292	Right-handed alpha
Helix 69	AH6	B	314	329	Right-handed alpha
Helix 70	AH7	B	343	348	Right-handed alpha
Helix 71	AH8	B	350	363	Right-handed alpha
Helix 72	AH9	B	377	391	Right-handed alpha
Helix 73	AI1	B	400	415	Right-handed alpha
Helix 74	AI2	B	462	468	Right-handed alpha
Helix 75	AI3	B	488	494	Right-handed alpha
Helix 76	AI4	B	526	531	Right-handed 310
Helix 77	AI5	B	537	549	Right-handed alpha
Helix 78	AI6	B	550	556	Right-handed alpha
Helix 79	AI7	C	15	30	Right-handed alpha
Helix 80	AI8	C	46	50	Right-handed 310
Helix 81	AI9	C	69	79	Right-handed alpha
Helix 82	AJ1	C	83	85	Right-handed 310
Helix 83	AJ2	C	90	104	Right-handed alpha
Helix 84	AJ3	C	112	129	Right-handed alpha
Helix 85	AJ4	C	155	169	Right-handed alpha
Helix 86	AJ5	C	170	172	Right-handed 310
Helix 87	AJ6	C	193	205	Right-handed alpha
Helix 88	AJ7	C	222	234	Right-handed alpha
Helix 89	AJ8	C	248	250	Right-handed 310
Helix 90	AJ9	C	251	258	Right-handed alpha
Helix 91	AK1	C	262	269	Right-handed alpha
Helix 92	AK2	C	274	279	Right-handed alpha
Helix 93	AK3	C	280	282	Right-handed 310
Helix 94	AK4	C	283	292	Right-handed alpha
Helix 95	AK5	C	314	329	Right-handed alpha
Helix 96	AK6	C	343	348	Right-handed alpha
Helix 97	AK7	C	350	363	Right-handed alpha
Helix 98	AK8	C	377	391	Right-handed alpha
Helix 99	AK9	C	400	415	Right-handed alpha
Helix 100	AL1	C	462	468	Right-handed alpha
Helix 101	AL2	C	488	494	Right-handed alpha
Helix 102	AL3	C	526	531	Right-handed 310
Helix 103	AL4	C	537	549	Right-handed alpha
Helix 104	AL5	C	550	556	Right-handed alpha

There are 16 sheets in PDB entry 7WJ4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	87	89	first strand
Strand 2	D	34	40	parallel
Strand 3	D	141	146	parallel
Strand 4	D	2	8	parallel
Strand 5	D	174	181	parallel
Strand 6	D	212	216	parallel
Strand 7	D	240	243	parallel

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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	332	338	first strand
Strand 2	D	299	305	parallel
Strand 3	D	366	369	parallel
Strand 4	D	395	398	parallel
Strand 5	D	520	523	parallel
Strand 6	D	509	513	anti-parallel
Strand 7	D	501	502	anti-parallel
Strand 8	D	455	457	anti-parallel
Strand 9	D	473	474	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	419	421	first strand
Strand 2	D	430	435	parallel
Strand 3	D	482	484	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	451	452	first strand
Strand 2	D	477	478	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	87	89	first strand
Strand 2	A	34	40	parallel
Strand 3	A	141	146	parallel
Strand 4	A	2	8	parallel
Strand 5	A	174	181	parallel
Strand 6	A	212	216	parallel
Strand 7	A	240	243	parallel

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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	332	338	first strand
Strand 2	A	299	305	parallel
Strand 3	A	366	369	parallel
Strand 4	A	395	398	parallel
Strand 5	A	520	523	parallel
Strand 6	A	509	513	anti-parallel
Strand 7	A	501	502	anti-parallel
Strand 8	A	455	457	anti-parallel
Strand 9	A	473	474	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	419	421	first strand
Strand 2	A	430	435	parallel
Strand 3	A	482	484	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	451	452	first strand
Strand 2	A	477	478	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	87	89	first strand
Strand 2	B	34	40	parallel
Strand 3	B	141	146	parallel
Strand 4	B	2	8	parallel
Strand 5	B	174	181	parallel
Strand 6	B	212	216	parallel
Strand 7	B	240	243	parallel

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There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	332	338	first strand
Strand 2	B	299	305	parallel
Strand 3	B	366	369	parallel
Strand 4	B	395	398	parallel
Strand 5	B	520	523	parallel
Strand 6	B	509	513	anti-parallel
Strand 7	B	501	502	anti-parallel
Strand 8	B	455	457	anti-parallel
Strand 9	B	473	474	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	419	421	first strand
Strand 2	B	430	435	parallel
Strand 3	B	482	484	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	451	452	first strand
Strand 2	B	477	478	anti-parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	87	89	first strand
Strand 2	C	34	40	parallel
Strand 3	C	141	146	parallel
Strand 4	C	2	8	parallel
Strand 5	C	174	181	parallel
Strand 6	C	212	216	parallel
Strand 7	C	240	243	parallel

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There are 9 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	332	338	first strand
Strand 2	C	299	305	parallel
Strand 3	C	366	369	parallel
Strand 4	C	395	398	parallel
Strand 5	C	520	523	parallel
Strand 6	C	509	513	anti-parallel
Strand 7	C	501	502	anti-parallel
Strand 8	C	455	457	anti-parallel
Strand 9	C	473	474	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	419	421	first strand
Strand 2	C	430	435	parallel
Strand 3	C	482	484	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	451	452	first strand
Strand 2	C	477	478	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7WJ4

Analysis of interatomic Contacts of Structural Units in PDB entry:
7WJ4