Analysis of interatomic Contacts of Structural Units in PDB entry:
7WJ6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WJ6 entry

There are 2 chains in PDB entry 7WJ6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 7LEU 253
B
 ALA 5LEU 253
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 7WJ6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
52 67Right-handed alpha
Helix 2
AA2
A
99 104Right-handed 310
Helix 3
AA3
A
114 142Right-handed alpha
Helix 4
AA4
A
195 209Right-handed alpha
Helix 5
AA5
A
212 219Right-handed alpha
Helix 6
AA6
A
220 222Right-handed 310
Helix 7
AA7
A
223 235Right-handed alpha
Helix 8
AA8
A
238 251Right-handed alpha
Helix 9
AA9
B
46 50Right-handed 310
Helix 10
AB1
B
52 67Right-handed alpha
Helix 11
AB2
B
99 104Right-handed 310
Helix 12
AB3
B
114 142Right-handed alpha
Helix 13
AB4
B
194 209Right-handed alpha
Helix 14
AB5
B
212 219Right-handed alpha
Helix 15
AB6
B
220 222Right-handed 310
Helix 16
AB7
B
223 235Right-handed alpha
Helix 17
AB8
B
238 250Right-handed alpha
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There are 6 sheets in PDB entry 7WJ6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 18first strand
Strand 2
A
21 28anti-parallel
Strand 3
A
34 40anti-parallel
Strand 4
A
85 91anti-parallel
Strand 5
A
76 82anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 97first strand
Strand 2
A
154 156anti-parallel
Strand 3
A
162 164anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 145first strand
Strand 2
A
171 172anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 18first strand
Strand 2
B
21 28anti-parallel
Strand 3
B
34 40anti-parallel
Strand 4
B
85 91anti-parallel
Strand 5
B
76 82anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
96 97first strand
Strand 2
B
154 156anti-parallel
Strand 3
B
162 164anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
144 145first strand
Strand 2
B
171 172anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il