Analysis of interatomic Contacts of Structural Units in PDB entry:
7WJL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WJL entry

There is 1 chain in PDB entry 7WJL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 34LYS 496
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 7WJL. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
37 41Right-handed 310
Helix 2
AA2
A
48 53Right-handed 310
Helix 3
AA3
A
63 68Right-handed alpha
Helix 4
AA4
A
72 89Right-handed alpha
Helix 5
AA5
A
107 115Right-handed alpha
Helix 6
AA6
A
116 135Right-handed alpha
Helix 7
AA7
A
145 149Right-handed 310
Helix 8
AA8
A
154 175Right-handed alpha
Helix 9
AA9
A
178 182Right-handed 310
Helix 10
AB1
A
209 223Right-handed alpha
Helix 11
AB2
A
237 248Right-handed alpha
Helix 12
AB3
A
293 300Right-handed alpha
Helix 13
AB4
A
322 333Right-handed alpha
Helix 14
AB5
A
335 355Right-handed alpha
Helix 15
AB6
A
388 406Right-handed alpha
Helix 16
AB7
A
419 435Right-handed alpha
Helix 17
AB8
A
440 444Right-handed 310
Helix 18
AB9
A
445 454Right-handed alpha
Helix 19
AC1
A
455 457Right-handed 310
Helix 20
AC2
A
471 486Right-handed alpha
Helix 21
AC3
A
489 494Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7WJL.

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
93 97first strand
Strand 2
A
42 46parallel
Strand 3
A
185 189parallel
Strand 4
A
410 414parallel
Strand 5
A
361 367parallel
Strand 6
A
226 231parallel
Strand 7
A
273 280parallel
Strand 8
A
310 316parallel
Strand 9
A
303 307anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il