Analysis of interatomic Contacts of Structural Units in PDB entry:
7WJQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WJQ entry

There are 2 chains in PDB entry 7WJQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 23ASP 262
B
 PHE 2GLU 404
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 7WJQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 36Right-handed alpha
Helix 2
AA2
A
43 57Right-handed alpha
Helix 3
AA3
A
217 221Right-handed 310
Helix 4
AA4
A
237 248Right-handed alpha
Helix 5
AA5
B
3 18Right-handed alpha
Helix 6
AA6
B
30 34Right-handed 310
Helix 7
AA7
B
58 62Right-handed alpha
Helix 8
AA8
B
77 89Right-handed alpha
Helix 9
AA9
B
126 132Right-handed alpha
Helix 10
AB1
B
143 148Right-handed alpha
Helix 11
AB2
B
151 153Right-handed 310
Helix 12
AB3
B
248 262Right-handed alpha
Helix 13
AB4
B
264 277Right-handed alpha
Helix 14
AB5
B
281 299Right-handed alpha
Helix 15
AB6
B
307 313Right-handed alpha
Helix 16
AB7
B
322 338Right-handed alpha
Helix 17
AB8
B
339 341Right-handed 310
Helix 18
AB9
B
342 353Right-handed alpha
Helix 19
AC1
B
354 369Right-handed alpha
Helix 20
AC2
B
383 403Right-handed alpha
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There are 4 sheets in PDB entry 7WJQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 63first strand
Strand 2
A
81 83parallel
Strand 3
A
101 103parallel
Strand 4
A
121 123parallel
Strand 5
A
141 143parallel
Strand 6
A
161 163parallel
Strand 7
A
181 183parallel
Strand 8
A
204 207parallel
Strand 9
A
227 230parallel
Strand 10
A
258 260parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 24first strand
Strand 2
B
204 211anti-parallel
Strand 3
B
155 164anti-parallel
Strand 4
B
38 45anti-parallel
Strand 5
B
48 57anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 24first strand
Strand 2
B
204 211anti-parallel
Strand 3
B
155 164anti-parallel
Strand 4
B
117 125anti-parallel
Strand 5
B
90 99anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
104 106first strand
Strand 2
B
168 172anti-parallel
Strand 3
B
195 199anti-parallel
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