Analysis of interatomic Contacts of Structural Units in PDB entry:
7WJR

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7WJR entry

There are 4 chains in PDB entry 7WJR (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	HIS 0	ALA 338
B	HIS 0	ALA 338
C	HIS 0	ALA 338
D	HIS 0	ALA 338

There are 96 helices in PDB entry 7WJR. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	15	Right-handed 310
Helix 2	AA2	A	16	28	Right-handed alpha
Helix 3	AA3	A	30	40	Right-handed alpha
Helix 4	AA4	A	43	53	Right-handed alpha
Helix 5	AA5	A	64	69	Right-handed 310
Helix 6	AA6	A	71	91	Right-handed alpha
Helix 7	AA7	A	107	123	Right-handed alpha
Helix 8	AA8	A	147	149	Right-handed 310
Helix 9	AA9	A	150	161	Right-handed alpha
Helix 10	AB1	A	172	180	Right-handed alpha
Helix 11	AB2	A	181	187	Right-handed 310
Helix 12	AB3	A	191	207	Right-handed alpha
Helix 13	AB4	A	208	213	Right-handed alpha
Helix 14	AB5	A	222	225	Right-handed 310
Helix 15	AB6	A	226	229	Right-handed 310
Helix 16	AB7	A	230	240	Right-handed alpha
Helix 17	AB8	A	241	245	Right-handed 310
Helix 18	AB9	A	246	250	Right-handed 310
Helix 19	AC1	A	254	262	Right-handed alpha
Helix 20	AC2	A	272	283	Right-handed alpha
Helix 21	AC3	A	284	286	Right-handed 310
Helix 22	AC4	A	298	309	Right-handed alpha
Helix 23	AC5	A	312	321	Right-handed alpha
Helix 24	AC6	A	321	328	Right-handed alpha
Helix 25	AC7	B	13	15	Right-handed 310
Helix 26	AC8	B	16	28	Right-handed alpha
Helix 27	AC9	B	30	40	Right-handed alpha
Helix 28	AD1	B	43	52	Right-handed alpha
Helix 29	AD2	B	64	69	Right-handed 310
Helix 30	AD3	B	71	91	Right-handed alpha
Helix 31	AD4	B	107	123	Right-handed alpha
Helix 32	AD5	B	147	149	Right-handed 310
Helix 33	AD6	B	150	161	Right-handed alpha
Helix 34	AD7	B	172	180	Right-handed alpha
Helix 35	AD8	B	181	187	Right-handed 310
Helix 36	AD9	B	191	207	Right-handed alpha
Helix 37	AE1	B	208	213	Right-handed alpha
Helix 38	AE2	B	221	225	Right-handed 310
Helix 39	AE3	B	226	229	Right-handed 310
Helix 40	AE4	B	230	240	Right-handed alpha
Helix 41	AE5	B	241	245	Right-handed 310
Helix 42	AE6	B	246	250	Right-handed 310
Helix 43	AE7	B	254	262	Right-handed alpha
Helix 44	AE8	B	272	283	Right-handed alpha
Helix 45	AE9	B	284	286	Right-handed 310
Helix 46	AF1	B	298	309	Right-handed alpha
Helix 47	AF2	B	312	321	Right-handed alpha
Helix 48	AF3	B	321	328	Right-handed alpha
Helix 49	AF4	C	13	15	Right-handed 310
Helix 50	AF5	C	16	28	Right-handed alpha
Helix 51	AF6	C	30	40	Right-handed alpha
Helix 52	AF7	C	43	53	Right-handed alpha
Helix 53	AF8	C	64	69	Right-handed 310
Helix 54	AF9	C	71	91	Right-handed alpha
Helix 55	AG1	C	107	123	Right-handed alpha
Helix 56	AG2	C	147	149	Right-handed 310
Helix 57	AG3	C	150	161	Right-handed alpha
Helix 58	AG4	C	172	180	Right-handed alpha
Helix 59	AG5	C	181	187	Right-handed 310
Helix 60	AG6	C	191	207	Right-handed alpha
Helix 61	AG7	C	208	213	Right-handed alpha
Helix 62	AG8	C	222	225	Right-handed 310
Helix 63	AG9	C	226	229	Right-handed 310
Helix 64	AH1	C	230	240	Right-handed alpha
Helix 65	AH2	C	241	245	Right-handed 310
Helix 66	AH3	C	246	250	Right-handed 310
Helix 67	AH4	C	254	262	Right-handed alpha
Helix 68	AH5	C	272	283	Right-handed alpha
Helix 69	AH6	C	284	286	Right-handed 310
Helix 70	AH7	C	298	309	Right-handed alpha
Helix 71	AH8	C	312	321	Right-handed alpha
Helix 72	AH9	C	321	328	Right-handed alpha
Helix 73	AI1	D	13	15	Right-handed 310
Helix 74	AI2	D	16	28	Right-handed alpha
Helix 75	AI3	D	30	40	Right-handed alpha
Helix 76	AI4	D	43	53	Right-handed alpha
Helix 77	AI5	D	64	69	Right-handed 310
Helix 78	AI6	D	71	91	Right-handed alpha
Helix 79	AI7	D	107	123	Right-handed alpha
Helix 80	AI8	D	147	149	Right-handed 310
Helix 81	AI9	D	150	161	Right-handed alpha
Helix 82	AJ1	D	172	180	Right-handed alpha
Helix 83	AJ2	D	181	187	Right-handed 310
Helix 84	AJ3	D	191	207	Right-handed alpha
Helix 85	AJ4	D	208	213	Right-handed alpha
Helix 86	AJ5	D	221	225	Right-handed 310
Helix 87	AJ6	D	226	229	Right-handed 310
Helix 88	AJ7	D	230	240	Right-handed alpha
Helix 89	AJ8	D	241	245	Right-handed 310
Helix 90	AJ9	D	246	250	Right-handed 310
Helix 91	AK1	D	254	262	Right-handed alpha
Helix 92	AK2	D	272	283	Right-handed alpha
Helix 93	AK3	D	284	286	Right-handed 310
Helix 94	AK4	D	298	309	Right-handed alpha
Helix 95	AK5	D	312	321	Right-handed alpha
Helix 96	AK6	D	321	328	Right-handed alpha

There are 12 sheets in PDB entry 7WJR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4	11	first strand
Strand 2	A	54	61	parallel
Strand 3	A	97	99	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	127	130	first strand
Strand 2	A	164	167	parallel
Strand 3	A	218	220	parallel
Strand 4	A	263	266	parallel
Strand 5	A	288	289	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	133	135	first strand
Strand 2	A	141	143	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	4	11	first strand
Strand 2	B	54	61	parallel
Strand 3	B	97	99	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	127	130	first strand
Strand 2	B	164	167	parallel
Strand 3	B	218	220	parallel
Strand 4	B	263	266	parallel
Strand 5	B	288	289	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	133	135	first strand
Strand 2	B	141	143	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	4	11	first strand
Strand 2	C	54	61	parallel
Strand 3	C	97	99	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	127	130	first strand
Strand 2	C	164	167	parallel
Strand 3	C	218	220	parallel
Strand 4	C	263	266	parallel
Strand 5	C	288	289	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	133	135	first strand
Strand 2	C	141	143	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	4	11	first strand
Strand 2	D	54	61	parallel
Strand 3	D	97	99	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	127	130	first strand
Strand 2	D	164	167	parallel
Strand 3	D	218	220	parallel
Strand 4	D	263	266	parallel
Strand 5	D	288	289	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	133	135	first strand
Strand 2	D	141	143	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7WJR

Analysis of interatomic Contacts of Structural Units in PDB entry:
7WJR