Analysis of interatomic Contacts of Structural Units in PDB entry:
7WK6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WK6 entry

There are 2 chains in PDB entry 7WK6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 THR 333GLY 526
A
 SER 19ASP 615
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 7WK6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
E
349 353Right-handed 310
Helix 2
AA2
E
364 372Right-handed alpha
Helix 3
AA3
E
417 422Right-handed alpha
Helix 4
AA4
A
20 49Right-handed alpha
Helix 5
AA5
A
55 80Right-handed alpha
Helix 6
AA6
A
81 83Right-handed 310
Helix 7
AA7
A
90 98Right-handed alpha
Helix 8
AA8
A
109 129Right-handed alpha
Helix 9
AA9
A
158 167Right-handed alpha
Helix 10
AB1
A
168 170Right-handed 310
Helix 11
AB2
A
176 192Right-handed alpha
Helix 12
AB3
A
199 204Right-handed alpha
Helix 13
AB4
A
219 231Right-handed alpha
Helix 14
AB5
A
233 248Right-handed alpha
Helix 15
AB6
A
265 267Right-handed 310
Helix 16
AB7
A
275 279Right-handed 310
Helix 17
AB8
A
293 298Right-handed alpha
Helix 18
AB9
A
303 316Right-handed alpha
Helix 19
AC1
A
326 331Right-handed alpha
Helix 20
AC2
A
365 383Right-handed alpha
Helix 21
AC3
A
384 388Right-handed 310
Helix 22
AC4
A
389 393Right-handed 310
Helix 23
AC5
A
400 412Right-handed alpha
Helix 24
AC6
A
414 419Right-handed alpha
Helix 25
AC7
A
434 447Right-handed alpha
Helix 26
AC8
A
448 465Right-handed alpha
Helix 27
AC9
A
469 473Right-handed 310
Helix 28
AD1
A
474 479Right-handed alpha
Helix 29
AD2
A
498 502Right-handed 310
Helix 30
AD3
A
503 508Right-handed alpha
Helix 31
AD4
A
513 523Right-handed alpha
Helix 32
AD5
A
523 533Right-handed alpha
Helix 33
AD6
A
538 542Right-handed 310
Helix 34
AD7
A
548 559Right-handed alpha
Helix 35
AD8
A
565 572Right-handed alpha
Helix 36
AD9
A
581 588Right-handed alpha
Helix 37
AE1
A
588 599Right-handed alpha
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There are 5 sheets in PDB entry 7WK6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
354 358first strand
Strand 2
E
395 402anti-parallel
Strand 3
E
508 514anti-parallel
Strand 4
E
433 437anti-parallel
Strand 5
E
376 378anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
452 454first strand
Strand 2
E
492 494anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
473 474first strand
Strand 2
E
488 489anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 263first strand
Strand 2
A
487 488parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 352first strand
Strand 2
A
355 359anti-parallel
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