Analysis of interatomic Contacts of Structural Units in PDB entry:
7WK7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WK7 entry

There are 2 chains in PDB entry 7WK7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 18GLU 737
B
 CYS 18GLU 737
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 7WK7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 34Right-handed alpha
Helix 2
AA2
A
45 54Right-handed alpha
Helix 3
AA3
A
57 69Right-handed alpha
Helix 4
AA4
A
70 75Right-handed alpha
Helix 5
AA5
A
79 106Right-handed alpha
Helix 6
AA6
A
112 120Right-handed alpha
Helix 7
AA7
A
121 127Right-handed alpha
Helix 8
AA8
A
141 156Right-handed alpha
Helix 9
AA9
A
157 161Right-handed 310
Helix 10
AB1
A
180 206Right-handed alpha
Helix 11
AB2
A
209 215Right-handed 310
Helix 12
AB3
A
216 241Right-handed alpha
Helix 13
AB4
A
251 263Right-handed alpha
Helix 14
AB5
A
268 292Right-handed alpha
Helix 15
AB6
A
301 317Right-handed alpha
Helix 16
AB7
A
349 374Right-handed alpha
Helix 17
AB8
A
380 397Right-handed alpha
Helix 18
AB9
A
406 416Right-handed alpha
Helix 19
AC1
A
421 437Right-handed alpha
Helix 20
AC2
A
446 457Right-handed alpha
Helix 21
AC3
A
458 463Right-handed alpha
Helix 22
AC4
A
464 466Right-handed 310
Helix 23
AC5
A
467 474Right-handed alpha
Helix 24
AC6
A
475 492Right-handed alpha
Helix 25
AC7
A
494 515Right-handed alpha
Helix 26
AC8
A
558 571Right-handed alpha
Helix 27
AC9
A
573 595Right-handed alpha
Helix 28
AD1
A
670 686Right-handed alpha
Helix 29
AD2
A
696 706Right-handed alpha
Helix 30
AD3
A
714 718Right-handed 310
Helix 31
AD4
A
721 736Right-handed alpha
Helix 32
AD5
B
29 34Right-handed alpha
Helix 33
AD6
B
45 54Right-handed alpha
Helix 34
AD7
B
57 69Right-handed alpha
Helix 35
AD8
B
70 75Right-handed alpha
Helix 36
AD9
B
79 105Right-handed alpha
Helix 37
AE1
B
106 110Right-handed 310
Helix 38
AE2
B
113 119Right-handed alpha
Helix 39
AE3
B
121 127Right-handed alpha
Helix 40
AE4
B
141 156Right-handed alpha
Helix 41
AE5
B
157 161Right-handed 310
Helix 42
AE6
B
180 206Right-handed alpha
Helix 43
AE7
B
209 213Right-handed 310
Helix 44
AE8
B
216 241Right-handed alpha
Helix 45
AE9
B
251 263Right-handed alpha
Helix 46
AF1
B
268 292Right-handed alpha
Helix 47
AF2
B
301 317Right-handed alpha
Helix 48
AF3
B
349 374Right-handed alpha
Helix 49
AF4
B
380 397Right-handed alpha
Helix 50
AF5
B
406 416Right-handed alpha
Helix 51
AF6
B
421 437Right-handed alpha
Helix 52
AF7
B
446 457Right-handed alpha
Helix 53
AF8
B
458 463Right-handed alpha
Helix 54
AF9
B
464 466Right-handed 310
Helix 55
AG1
B
467 474Right-handed alpha
Helix 56
AG2
B
475 492Right-handed alpha
Helix 57
AG3
B
494 515Right-handed alpha
Helix 58
AG4
B
558 571Right-handed alpha
Helix 59
AG5
B
573 595Right-handed alpha
Helix 60
AG6
B
669 686Right-handed alpha
Helix 61
AG7
B
696 706Right-handed alpha
Helix 62
AG8
B
714 718Right-handed 310
Helix 63
AG9
B
721 736Right-handed alpha
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There are 9 sheets in PDB entry 7WK7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 25first strand
Strand 2
B
19 25anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 139first strand
Strand 2
A
404 405anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 164first strand
Strand 2
A
174 175anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
522 523first strand
Strand 2
A
530 531anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
545 549first strand
Strand 2
A
657 661parallel
Strand 3
A
689 692parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
138 139first strand
Strand 2
B
404 405anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
163 164first strand
Strand 2
B
174 175anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
522 523first strand
Strand 2
B
530 531anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
545 549first strand
Strand 2
B
657 661parallel
Strand 3
B
689 692parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il