Analysis of interatomic Contacts of Structural Units in PDB entry:
7WKS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WKS entry

There are 2 chains in PDB entry 7WKS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 SER 3LEU 640
A
 SER 3LEU 640
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 7WKS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
4 30Right-handed alpha
Helix 2
AA2
B
35 62Right-handed alpha
Helix 3
AA3
B
68 92Right-handed alpha
Helix 4
AA4
B
97 110Right-handed alpha
Helix 5
AA5
B
116 125Right-handed alpha
Helix 6
AA6
B
126 143Right-handed alpha
Helix 7
AA7
B
143 165Right-handed alpha
Helix 8
AA8
B
167 170Right-handed 310
Helix 9
AA9
B
475 492Right-handed alpha
Helix 10
AB1
B
494 514Right-handed alpha
Helix 11
AB2
B
518 530Right-handed alpha
Helix 12
AB3
B
531 547Right-handed alpha
Helix 13
AB4
B
554 581Right-handed alpha
Helix 14
AB5
B
584 595Right-handed alpha
Helix 15
AB6
B
599 610Right-handed alpha
Helix 16
AB7
B
612 639Right-handed alpha
Helix 17
AB8
A
4 30Right-handed alpha
Helix 18
AB9
A
35 62Right-handed alpha
Helix 19
AC1
A
68 92Right-handed alpha
Helix 20
AC2
A
97 110Right-handed alpha
Helix 21
AC3
A
116 125Right-handed alpha
Helix 22
AC4
A
126 143Right-handed alpha
Helix 23
AC5
A
143 165Right-handed alpha
Helix 24
AC6
A
167 170Right-handed 310
Helix 25
AC7
A
475 492Right-handed alpha
Helix 26
AC8
A
494 514Right-handed alpha
Helix 27
AC9
A
518 530Right-handed alpha
Helix 28
AD1
A
531 547Right-handed alpha
Helix 29
AD2
A
554 581Right-handed alpha
Helix 30
AD3
A
584 595Right-handed alpha
Helix 31
AD4
A
599 610Right-handed alpha
Helix 32
AD5
A
612 639Right-handed alpha
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There are 2 sheets in PDB entry 7WKS. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
172 177first strand
Strand 2
B
202 208parallel
Strand 3
B
190 196anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 177first strand
Strand 2
A
202 208parallel
Strand 3
A
190 196anti-parallel
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