Analysis of interatomic Contacts of Structural Units in PDB entry:
7WKV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WKV entry

There are 9 chains in PDB entry 7WKV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 74LEU 292
B
 G 2 G 3
B
 C 5 C 5
C
 GLN 74LEU 292
D
 G 2 G 3
D
 C 5 C 5
E
 GLN 74LEU 292
F
 G 2 G 3
F
 C 5 C 5
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 7WKV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
74 88Right-handed alpha
Helix 2
AA2
A
96 116Right-handed alpha
Helix 3
AA3
A
120 122Right-handed 310
Helix 4
AA4
A
141 145Right-handed 310
Helix 5
AA5
A
165 172Right-handed alpha
Helix 6
AA6
A
172 179Right-handed alpha
Helix 7
AA7
A
258 263Right-handed alpha
Helix 8
AA8
A
269 273Right-handed 310
Helix 9
AA9
C
75 88Right-handed alpha
Helix 10
AB1
C
96 116Right-handed alpha
Helix 11
AB2
C
120 122Right-handed 310
Helix 12
AB3
C
141 145Right-handed 310
Helix 13
AB4
C
165 172Right-handed alpha
Helix 14
AB5
C
172 179Right-handed alpha
Helix 15
AB6
C
258 263Right-handed alpha
Helix 16
AB7
C
269 273Right-handed 310
Helix 17
AB8
E
75 88Right-handed alpha
Helix 18
AB9
E
96 116Right-handed alpha
Helix 19
AC1
E
120 122Right-handed 310
Helix 20
AC2
E
141 145Right-handed 310
Helix 21
AC3
E
165 172Right-handed alpha
Helix 22
AC4
E
172 179Right-handed alpha
Helix 23
AC5
E
258 263Right-handed alpha
Helix 24
AC6
E
269 273Right-handed 310
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There are 10 sheets in PDB entry 7WKV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 93first strand
Strand 2
A
252 256anti-parallel
Strand 3
A
211 220anti-parallel
Strand 4
A
277 285anti-parallel
Strand 5
A
189 195anti-parallel
Strand 6
A
130 135anti-parallel
Strand 7
A
124 127anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 140first strand
Strand 2
A
154 155anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 204first strand
Strand 2
A
266 268anti-parallel
Strand 3
A
224 228anti-parallel
Strand 4
A
244 248anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
232 233first strand
Strand 2
A
238 239anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
89 93first strand
Strand 2
C
252 256anti-parallel
Strand 3
C
215 220anti-parallel
Strand 4
C
277 283anti-parallel
Strand 5
C
189 195anti-parallel
Strand 6
C
130 135anti-parallel
Strand 7
C
124 127anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
201 204first strand
Strand 2
C
266 268anti-parallel
Strand 3
C
224 228anti-parallel
Strand 4
C
244 248anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
232 233first strand
Strand 2
C
238 239anti-parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
89 93first strand
Strand 2
E
252 256anti-parallel
Strand 3
E
215 220anti-parallel
Strand 4
E
277 283anti-parallel
Strand 5
E
189 195anti-parallel
Strand 6
E
130 135anti-parallel
Strand 7
E
124 127anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
201 204first strand
Strand 2
E
266 268anti-parallel
Strand 3
E
224 228anti-parallel
Strand 4
E
244 248anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
232 233first strand
Strand 2
E
238 239anti-parallel
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