Analysis of interatomic Contacts of Structural Units in PDB entry:
7WM6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WM6 entry

There are 4 chains in PDB entry 7WM6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASP 240
B
 LEU 26PHE 238
C
 MET 1ASP 240
D
 MET 1ASP 240
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 7WM6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 35Right-handed alpha
Helix 2
AA2
A
52 59Right-handed alpha
Helix 3
AA3
A
72 86Right-handed alpha
Helix 4
AA4
A
98 106Right-handed alpha
Helix 5
AA5
A
125 130Right-handed 310
Helix 6
AA6
A
132 140Right-handed alpha
Helix 7
AA7
A
145 156Right-handed alpha
Helix 8
AA8
A
171 182Right-handed alpha
Helix 9
AA9
A
231 236Right-handed alpha
Helix 10
AB1
B
27 35Right-handed alpha
Helix 11
AB2
B
52 60Right-handed alpha
Helix 12
AB3
B
72 87Right-handed alpha
Helix 13
AB4
B
98 105Right-handed alpha
Helix 14
AB5
B
145 156Right-handed alpha
Helix 15
AB6
B
171 182Right-handed alpha
Helix 16
AB7
B
231 237Right-handed alpha
Helix 17
AB8
C
25 35Right-handed alpha
Helix 18
AB9
C
52 59Right-handed alpha
Helix 19
AC1
C
72 87Right-handed alpha
Helix 20
AC2
C
98 104Right-handed alpha
Helix 21
AC3
C
132 140Right-handed alpha
Helix 22
AC4
C
145 156Right-handed alpha
Helix 23
AC5
C
171 182Right-handed alpha
Helix 24
AC6
C
231 236Right-handed alpha
Helix 25
AC7
D
25 35Right-handed alpha
Helix 26
AC8
D
52 60Right-handed alpha
Helix 27
AC9
D
72 87Right-handed alpha
Helix 28
AD1
D
98 103Right-handed alpha
Helix 29
AD2
D
104 106Right-handed 310
Helix 30
AD3
D
132 138Right-handed alpha
Helix 31
AD4
D
145 155Right-handed alpha
Helix 32
AD5
D
171 182Right-handed alpha
Helix 33
AD6
D
231 236Right-handed alpha
Helix 34
AD7
D
237 239Right-handed 310
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There are 9 sheets in PDB entry 7WM6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 6first strand
Strand 2
A
14 18anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 96first strand
Strand 2
A
65 70parallel
Strand 3
A
43 47parallel
Strand 4
A
110 115parallel
Strand 5
A
157 168parallel
Strand 6
A
202 209anti-parallel
Strand 7
A
184 193anti-parallel
Strand 8
A
216 217parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 96first strand
Strand 2
A
65 70parallel
Strand 3
A
43 47parallel
Strand 4
A
110 115parallel
Strand 5
A
157 168parallel
Strand 6
A
202 209anti-parallel
Strand 7
A
184 193anti-parallel
Strand 8
A
221 222parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 95first strand
Strand 2
B
65 69parallel
Strand 3
B
43 47parallel
Strand 4
B
110 115parallel
Strand 5
B
157 168parallel
Strand 6
B
200 209anti-parallel
Strand 7
B
184 193anti-parallel
Strand 8
B
216 217parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 95first strand
Strand 2
B
65 69parallel
Strand 3
B
43 47parallel
Strand 4
B
110 115parallel
Strand 5
B
157 168parallel
Strand 6
B
200 209anti-parallel
Strand 7
B
184 193anti-parallel
Strand 8
B
221 222parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2 6first strand
Strand 2
C
14 18anti-parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
92 96first strand
Strand 2
C
65 70parallel
Strand 3
C
43 47parallel
Strand 4
C
110 115parallel
Strand 5
C
157 168parallel
Strand 6
C
202 209anti-parallel
Strand 7
C
184 193anti-parallel
Strand 8
C
216 222parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
2 6first strand
Strand 2
D
14 18anti-parallel
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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
92 96first strand
Strand 2
D
65 70parallel
Strand 3
D
43 47parallel
Strand 4
D
110 115parallel
Strand 5
D
157 168parallel
Strand 6
D
200 209anti-parallel
Strand 7
D
184 193anti-parallel
Strand 8
D
216 222parallel
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