Analysis of interatomic Contacts of Structural Units in PDB entry:
7WMC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WMC entry

There are 11 chains in PDB entry 7WMC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 4LEU 260
C
 GLY 500PHE 501
C
 ARG 503GLY 504
C
 TRP 506CYS 508
E
 GLY 600PHE 601
E
 ARG 603GLY 604
E
 TRP 606CYS 608
B
 GLY 4LEU 260
D
 GLY 500PHE 501
D
 ARG 503GLY 504
D
 TRP 506CYS 508
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 7WMC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 25Right-handed alpha
Helix 2
AA2
A
27 51Right-handed alpha
Helix 3
AA3
A
68 72Right-handed 310
Helix 4
AA4
A
73 76Right-handed 310
Helix 5
AA5
A
87 99Right-handed alpha
Helix 6
AA6
A
107 118Right-handed alpha
Helix 7
AA7
A
123 134Right-handed alpha
Helix 8
AA8
A
164 170Right-handed alpha
Helix 9
AA9
A
172 185Right-handed alpha
Helix 10
AB1
A
218 228Right-handed alpha
Helix 11
AB2
B
16 25Right-handed alpha
Helix 12
AB3
B
32 51Right-handed alpha
Helix 13
AB4
B
68 72Right-handed 310
Helix 14
AB5
B
73 77Right-handed alpha
Helix 15
AB6
B
87 99Right-handed alpha
Helix 16
AB7
B
107 118Right-handed alpha
Helix 17
AB8
B
123 134Right-handed alpha
Helix 18
AB9
B
164 170Right-handed alpha
Helix 19
AC1
B
172 185Right-handed alpha
Helix 20
AC2
B
217 228Right-handed alpha
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There are 2 sheets in PDB entry 7WMC. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 140first strand
Strand 2
A
78 85parallel
Strand 3
A
56 62parallel
Strand 4
A
157 163parallel
Strand 5
A
187 198parallel
Strand 6
A
252 259anti-parallel
Strand 7
A
230 237anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
135 140first strand
Strand 2
B
78 85parallel
Strand 3
B
56 62parallel
Strand 4
B
157 163parallel
Strand 5
B
187 199parallel
Strand 6
B
251 259anti-parallel
Strand 7
B
230 237anti-parallel
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