Analysis of interatomic Contacts of Structural Units in PDB entry:
7WMG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WMG entry

There are 2 chains in PDB entry 7WMG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 211PHE 459
B
GLU 741LYS 751
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 17 helices in PDB entry 7WMG. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
215 232Right-handed alpha
Helix 2
AA2
A
237 238Right-handed 310
Helix 3
AA3
A
240 242Right-handed 310
Helix 4
AA4
A
266 274Right-handed alpha
Helix 5
AA5
A
275 289Right-handed alpha
Helix 6
AA6
A
290 295Right-handed alpha
Helix 7
AA7
A
297 319Right-handed alpha
Helix 8
AA8
A
337 344Right-handed alpha
Helix 9
AA9
A
347 361Right-handed alpha
Helix 10
AB1
A
362 364Right-handed 310
Helix 11
AB2
A
366 379Right-handed alpha
Helix 12
AB3
A
388 411Right-handed alpha
Helix 13
AB4
A
416 432Right-handed alpha
Helix 14
AB5
A
435 437Right-handed alpha
Helix 15
AB6
A
440 441Right-handed alpha
Helix 16
AB7
A
452 459Right-handed alpha
Helix 17
AB8
B
742 750Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 7WMG.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
328 330first strand
Strand 2
A
334 336anti-parallel
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il