Analysis of interatomic Contacts of Structural Units in PDB entry:
7WMK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WMK entry

There is 1 chain in PDB entry 7WMK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3GLU 577
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 7WMK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 30Right-handed alpha
Helix 2
AA2
A
59 63Right-handed 310
Helix 3
AA3
A
116 120Right-handed 310
Helix 4
AA4
A
122 127Right-handed 310
Helix 5
AA5
A
166 170Right-handed 310
Helix 6
AA6
A
223 227Right-handed 310
Helix 7
AA7
A
231 235Right-handed 310
Helix 8
AA8
A
264 269Right-handed alpha
Helix 9
AA9
A
388 391Right-handed 310
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There are 10 sheets in PDB entry 7WMK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 50first strand
Strand 2
A
489 492parallel
Strand 3
A
496 500anti-parallel
Strand 4
A
505 510anti-parallel
Strand 5
A
516 521anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 70first strand
Strand 2
A
569 574anti-parallel
Strand 3
A
538 545anti-parallel
Strand 4
A
530 535anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 83first strand
Strand 2
A
86 90anti-parallel
Strand 3
A
95 100anti-parallel
Strand 4
A
106 111anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 134first strand
Strand 2
A
137 141anti-parallel
Strand 3
A
146 151anti-parallel
Strand 4
A
157 162anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 180first strand
Strand 2
A
183 186anti-parallel
Strand 3
A
198 203anti-parallel
Strand 4
A
209 214anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
245 247first strand
Strand 2
A
252 256anti-parallel
Strand 3
A
280 284anti-parallel
Strand 4
A
291 296anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
312 317first strand
Strand 2
A
339 345anti-parallel
Strand 3
A
353 357anti-parallel
Strand 4
A
363 367anti-parallel
Strand 5
A
327 330anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
375 378first strand
Strand 2
A
384 386anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
400 401first strand
Strand 2
A
430 433anti-parallel
Strand 3
A
454 455anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
415 417first strand
Strand 2
A
422 428anti-parallel
Strand 3
A
463 469anti-parallel
Strand 4
A
475 481anti-parallel
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