Analysis of interatomic Contacts of Structural Units in PDB entry:
7WMT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WMT entry

There is 1 chain in PDB entry 7WMT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 4SER 261
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 11 helices in PDB entry 7WMT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 11Right-handed 310
Helix 2
AA2
A
16 25Right-handed alpha
Helix 3
AA3
A
33 51Right-handed alpha
Helix 4
AA4
A
68 72Right-handed 310
Helix 5
AA5
A
73 76Right-handed 310
Helix 6
AA6
A
87 99Right-handed alpha
Helix 7
AA7
A
107 118Right-handed alpha
Helix 8
AA8
A
123 134Right-handed alpha
Helix 9
AA9
A
164 169Right-handed alpha
Helix 10
AB1
A
172 185Right-handed alpha
Helix 11
AB2
A
217 228Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 7WMT.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 140first strand
Strand 2
A
78 85parallel
Strand 3
A
56 61parallel
Strand 4
A
157 163parallel
Strand 5
A
187 198parallel
Strand 6
A
252 259anti-parallel
Strand 7
A
230 237anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il