Analysis of interatomic Contacts of Structural Units in PDB entry:
7WN1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WN1 entry

There are 2 chains in PDB entry 7WN1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 30PRO 413
C
 GLN 1SER 122
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 18 helices in PDB entry 7WN1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 59Right-handed alpha
Helix 2
AA2
A
62 83Right-handed alpha
Helix 3
AA3
A
86 88Right-handed 310
Helix 4
AA4
A
89 111Right-handed alpha
Helix 5
AA5
A
112 144Right-handed alpha
Helix 6
AA6
A
149 175Right-handed alpha
Helix 7
AA7
A
184 210Right-handed alpha
Helix 8
AA8
A
231 239Right-handed alpha
Helix 9
AA9
A
239 257Right-handed alpha
Helix 10
AB1
A
262 270Right-handed alpha
Helix 11
AB2
A
272 290Right-handed alpha
Helix 12
AB3
A
291 296Right-handed alpha
Helix 13
AB4
A
309 319Right-handed alpha
Helix 14
AB5
A
321 332Right-handed alpha
Helix 15
AB6
A
339 369Right-handed alpha
Helix 16
AB7
A
374 400Right-handed alpha
Helix 17
AB8
A
401 405Right-handed 310
Helix 18
AB9
C
86 90Right-handed 310
Back to top of page

There are 3 sheets in PDB entry 7WN1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
4 7first strand
Strand 2
C
18 24anti-parallel
Strand 3
C
77 82anti-parallel
Strand 4
C
67 71anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
10 12first strand
Strand 2
C
116 120parallel
Strand 3
C
91 100anti-parallel
Strand 4
C
33 39anti-parallel
Strand 5
C
45 52anti-parallel
Strand 6
C
57 59anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
10 12first strand
Strand 2
C
116 120parallel
Strand 3
C
91 100anti-parallel
Strand 4
C
108 112anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il