Analysis of interatomic Contacts of Structural Units in PDB entry:
7WNT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WNT entry

There is 1 chain in PDB entry 7WNT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 5PRO 553
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 7WNT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
64 69Right-handed alpha
Helix 2
AA2
A
70 72Right-handed 310
Helix 3
AA3
A
83 88Right-handed alpha
Helix 4
AA4
A
89 97Right-handed alpha
Helix 5
AA5
A
105 118Right-handed alpha
Helix 6
AA6
A
184 195Right-handed alpha
Helix 7
AA7
A
214 216Right-handed 310
Helix 8
AA8
A
217 229Right-handed alpha
Helix 9
AA9
A
241 255Right-handed alpha
Helix 10
AB1
A
263 276Right-handed alpha
Helix 11
AB2
A
282 286Right-handed 310
Helix 12
AB3
A
288 295Right-handed 310
Helix 13
AB4
A
296 298Right-handed 310
Helix 14
AB5
A
313 320Right-handed alpha
Helix 15
AB6
A
344 359Right-handed alpha
Helix 16
AB7
A
377 389Right-handed alpha
Helix 17
AB8
A
399 413Right-handed alpha
Helix 18
AB9
A
416 420Right-handed 310
Helix 19
AC1
A
458 468Right-handed alpha
Helix 20
AC2
A
500 503Right-handed 310
Helix 21
AC3
A
504 516Right-handed alpha
Helix 22
AC4
A
529 545Right-handed alpha
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There are 5 sheets in PDB entry 7WNT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 127first strand
Strand 2
A
102 104parallel
Strand 3
A
74 78parallel
Strand 4
A
39 43parallel
Strand 5
A
31 36anti-parallel
Strand 6
A
16 22anti-parallel
Strand 7
A
427 432anti-parallel
Strand 8
A
435 441anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 61first strand
Strand 2
A
447 450anti-parallel
Strand 3
A
453 454anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 136first strand
Strand 2
A
139 146anti-parallel
Strand 3
A
153 160anti-parallel
Strand 4
A
163 167anti-parallel
Strand 5
A
198 202parallel
Strand 6
A
392 396parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 262first strand
Strand 2
A
300 304parallel
Strand 3
A
233 236parallel
Strand 4
A
333 336parallel
Strand 5
A
361 363parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
493 494first strand
Strand 2
A
472 474anti-parallel
Strand 3
A
550 552parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il