Analysis of interatomic Contacts of Structural Units in PDB entry:
7WNX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WNX entry

There is 1 chain in PDB entry 7WNX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE -4ARG 760
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 7WNX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
-2 12Right-handed alpha
Helix 2
AA2
A
14 32Right-handed alpha
Helix 3
AA3
A
48 61Right-handed alpha
Helix 4
AA4
A
83 101Right-handed alpha
Helix 5
AA5
A
121 125Right-handed 310
Helix 6
AA6
A
143 160Right-handed alpha
Helix 7
AA7
A
171 206Right-handed alpha
Helix 8
AA8
A
208 234Right-handed alpha
Helix 9
AA9
A
241 250Right-handed alpha
Helix 10
AB1
A
252 269Right-handed alpha
Helix 11
AB2
A
270 272Right-handed 310
Helix 12
AB3
A
274 302Right-handed alpha
Helix 13
AB4
A
303 307Right-handed 310
Helix 14
AB5
A
309 342Right-handed alpha
Helix 15
AB6
A
343 346Right-handed 310
Helix 16
AB7
A
384 399Right-handed alpha
Helix 17
AB8
A
401 415Right-handed alpha
Helix 18
AB9
A
416 421Right-handed 310
Helix 19
AC1
A
436 449Right-handed alpha
Helix 20
AC2
A
472 482Right-handed alpha
Helix 21
AC3
A
493 497Right-handed 310
Helix 22
AC4
A
525 536Right-handed alpha
Helix 23
AC5
A
548 581Right-handed alpha
Helix 24
AC6
A
586 612Right-handed alpha
Helix 25
AC7
A
616 621Right-handed alpha
Helix 26
AC8
A
631 659Right-handed alpha
Helix 27
AC9
A
663 695Right-handed alpha
Helix 28
AD1
A
698 731Right-handed alpha
Helix 29
AD2
A
739 748Right-handed alpha
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There are 5 sheets in PDB entry 7WNX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 39first strand
Strand 2
A
238 239parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 110first strand
Strand 2
A
133 136anti-parallel
Strand 3
A
69 73anti-parallel
Strand 4
A
167 170anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
424 425first strand
Strand 2
A
627 628parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
461 462first strand
Strand 2
A
543 544anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
499 500first strand
Strand 2
A
516 517anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il